DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc1 and Odc2

DIOPT Version :9

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_477053.2 Gene:Odc2 / 35767 FlyBaseID:FBgn0013308 Length:393 Species:Drosophila melanogaster


Alignment Length:386 Identity:286/386 - (74%)
Similarity:338/386 - (87%) Gaps:1/386 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IQFYERELNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRL 72
            ||:|:.|||||:|||:.||:.||||||||||||:|||||||.||:|||:|.|||||||||:||:.
  Fly     8 IQYYDEELNIRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKF 72

  Fly    73 LAQLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHT 137
            ||.||.|||||||||:|||||..|||||||||:||||.|||.||||.||.|||||||:|:|||..
  Fly    73 LADLGTGFDCASKNELKLVLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRK 137

  Fly   138 HYPNSNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAY 202
            |||:||||||||||||:|.||||||:||||:.||||||||||:|.||||||||||||||||::||
  Fly   138 HYPDSNLIVRFKSEAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAY 202

  Fly   203 DRAIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPG 267
            ||||:||:|:||.|.::|:.|:.||:||||||.||..||:||:||||||:..|||:|:.||:|||
  Fly   203 DRAIEKAENIFKVGEMIGHKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELRFPDKRIRIISEPG 267

  Fly   268 RFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAESLP 332
            ||||.||.||:||:|||||:|::.|||||:|||||||::|:|..:.|..:.|..|.|||.|||||
  Fly   268 RFFVEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAESLP 332

  Fly   333 HLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTLYFQA 393
            .|||:||||||||:|||| ||.|||||.||||||||||||||||||.||||:||:|.:|:|
  Fly   333 KLKSVIWGPSCDAMDKIS-DLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPETRFFKA 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 LysA 16..391 CDD:223098 279/374 (75%)
PLPDE_III_ODC 30..391 CDD:143482 270/360 (75%)
Odc2NP_477053.2 LysA 21..385 CDD:223098 272/364 (75%)
PLPDE_III_ODC 30..390 CDD:143482 270/360 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450173
Domainoid 1 1.000 52 1.000 Domainoid score I4265
eggNOG 1 0.900 - - E1_COG0019
Homologene 1 1.000 - - H1906
Inparanoid 1 1.050 69 1.000 Inparanoid score I2473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D306092at33208
OrthoFinder 1 1.000 - - FOG0000435
OrthoInspector 1 1.000 - - mtm6462
orthoMCL 1 0.900 - - OOG6_100277
Panther 1 1.100 - - P PTHR11482
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X335
1211.800

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