DRSC/TRiP Functional Genomics Resources

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Protein Alignment Odc1 and F53F10.2

DIOPT Version :9

Sequence 1:NP_477052.2 Gene:Odc1 / 35766 FlyBaseID:FBgn0013307 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001379758.1 Gene:F53F10.2 / 171958 WormBaseID:WBGene00018764 Length:477 Species:Caenorhabditis elegans


Alignment Length:391 Identity:104/391 - (26%)
Similarity:177/391 - (45%) Gaps:36/391 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLA-QLGAGFD 81
            |.|...|...   |...:.|::::||:|...:.:|||::|.|||.||.||::.|:|: .:...|:
 Worm    45 RHVAARCGSY---QPFFVMDVAAIERRLEALRVMLPRVRPNYAVACNADPVLARVLSNNIDVNFE 106

  Fly    82 CASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIV 146
            .::..|::|| ..:|.|.|.:|.:.......::.|.....|...|::|.:|..:....|.:.:|:
 Worm   107 VSNTAELELV-SMNVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASPEAEIIL 170

  Fly   147 RFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAKN 211
            .........:.|    |||..| :...::.:|..|...|||....:|...: |:.|..::..|::
 Worm   171 AVCLPYSTGEVP----FGCSVD-EIEEILDMAHLLGANVTGIYLELGLRAT-LEDYITSVHDARS 229

  Fly   212 LF-----KFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFFV 271
            :|     ||..|.......|.:..|..|:.:.:|.....|:|..:...| :..:...|..|||.|
 Worm   230 IFETADQKFLTLRRVCFGNLSVPTGADGAVNNEFMSFCNSLNNVIDDLF-ESNIDFSASIGRFLV 293

  Fly   272 AAACTLVCKIHAKRE-----IRNE-----AGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYLD 326
            ..|.||...:..||.     |.|:     .|    .:|..||||||||.|...|.:.:.....::
 Worm   294 TNAFTLCTNVIGKRAMDAKFITNDDFDDGVG----FVYQTNDGVYGSFGCKQMDIKPLCKPLDVE 354

  Fly   327 N-AESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPKTLY 390
            | :|...|..::: ||:.|..|.....:....|..|:.|.:..|||:|:|:.|..:   ||...|
 Worm   355 NDSEEQLHFGTIL-GPTLDGTDVAQRLMKSRQLRVGEWLVWEQMGAFTIPVDSEHS---VPPVYY 415

  Fly   391 F 391
            :
 Worm   416 Y 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Odc1NP_477052.2 LysA 16..391 CDD:223098 103/389 (26%)
PLPDE_III_ODC 30..391 CDD:143482 100/377 (27%)
F53F10.2NP_001379758.1 PLPDE_III 55..416 CDD:412268 100/376 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D306092at33208
OrthoFinder 1 1.000 - - FOG0000435
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11482
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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