DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dic3 and GC2

DIOPT Version :10

Sequence 1:NP_610344.2 Gene:Dic3 / 35763 FlyBaseID:FBgn0033248 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster


Alignment Length:201 Identity:58/201 - (28%)
Similarity:92/201 - (45%) Gaps:33/201 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GGVCAAIAVTGTHPIDLIKVQLQTQSQ---ADR------KTVGE--ILKGIHERSGILGFYNGIS 68
            ||:.....:..|.|::|:|:|:|...:   |||      ||:..  :.|.:....||.|.|.|:.
  Fly   125 GGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGVG 189

  Fly    69 ASWFRQLTYTTTRFALYEAGKDYVDTQKVSSKMAL---ATFAGIVGGIVG----VPGDVVTVRLQ 126
            |:..|.:|::...|.|.....|....:...|..|:   :..||::.|:..    .|.|||..|||
  Fly   190 ATGVRDITFSMVYFPLMAWINDQGPRKSDGSGEAVFYWSLIAGLLSGMTSAFMVTPFDVVKTRLQ 254

  Fly   127 NDVKLPEEKRRNYKHVFDGLFRIYKEEGVSSLFRGTVPAVSRAVLLTIGTNAAYDQVKQMLKIAT 191
            .|    .||:  :|.:.|.:.|..||||:|:.|:|   .:.|.::|     |....:.||... .
  Fly   255 AD----GEKK--FKGIMDCVNRTLKEEGISAFFKG---GLCRIMVL-----APLFGIAQMFYF-L 304

  Fly   192 GAGEGV 197
            |.||.:
  Fly   305 GVGEKI 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic3NP_610344.2 Mito_carr 15..91 CDD:395101 24/86 (28%)
Mito_carr 93..187 CDD:395101 29/100 (29%)
Mito_carr 200..281 CDD:395101
GC2NP_731657.2 Mito_carr 16..106 CDD:395101
Mito_carr 123..203 CDD:395101 22/77 (29%)
Mito_carr 228..302 CDD:395101 28/87 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.