Protein Alignment CSN4 and RPN5

DIOPT Version :9

• Sequence 1: NP_001163080.1
• Gene: CSN4 / 35759
• FlyBaseID: FBgn0027054
• Length: 407
• Species: Drosophila melanogaster
• Sequence 2: NP_010134.1
• Gene: RPN5 / 851408
• SGDID: S000002306
• Length: 445
• Species: Saccharomyces cerevisiae
• Alignment Length: 434
• Identity: 94/434 - (21%)
• Similarity: 182/434 - (41%)
• Gaps: 67/434 - (15%)

  Fly    29 QADK-YRQLLK-------TVLTNTGQELIDGLRLFVEAIVNEHVSLVISRQILNDVGSELSKLP- 84
            :||| |.|:||       ::..|.....:|.| |.:|....:...|..|:::|..:...|:...
Yeast     8 KADKDYSQILKEEFPKIDSLAQNDCNSALDQL-LVLEKKTRQASDLASSKEVLAKIVDLLASRNK 71

  Fly    85 -DDLSKMLS-------------HFTLEKV------------NPRV-------------ISFEEQV 110
             |||::.|:             .:.::||            |.|:             |..|.:.
Yeast    72 WDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVER 136

  Fly   111 AGIRFHLANIYERNQQWRDAATVLVGIPLET-GQKQYSVECKLGTYLKIARLYLEDNDSVQAELF 174
            |.:...|..|.:...:..:||.:|..:.:|| |..:.|.  |:...|:...|.:...|..||.:
Yeast   137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSE--KIQFILEQMELSILKGDYSQATV- 198

  Fly   175 INRASLLQAETNS--EELQVLYKVCYARVLDYRRKFIEAAQRYNELSYRKIV--DQGERMTALKK 235
            ::|..|.:...|.  |.|::.|.....::..::|:::|.||...|:.....:  |:.:....|..
Yeast   199 LSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSH 263

  Fly   236 ALICTVLASAGQQRSRMLATLFKDERCQHLPAYGILEKMYLERIIRRSEL--QEFEALLQDHQKA 298
            .:...||:..|..::.::..:..|...:.|.:...|.|::....:.|..:  :.:|.:|.:...|
Yeast   264 IVYFLVLSPYGNLQNDLIHKIQNDNNLKKLESQESLVKLFTTNELMRWPIVQKTYEPVLNEDDLA 328

  Fly   299 ATSDGS----SILDRAVFEHNLLSASKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHI 359
            ...:.:    ..|.:.|.||||...|:.|:.||...|..|||:...:.|...|.::.:|.:...:
Yeast   329 FGGEANKHHWEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTETYISDLVNQGIIYAKV 393

  Fly   360 DQISAIVHFE----NRELLPQWDRQIQSLCYQVNSIIEKISVAE 399
            ::.:.||:||    :.:||.:|...:..|...:.:|...|:..|
Yeast   394 NRPAKIVNFEKPKNSSQLLNEWSHNVDELLEHIETIGHLITKEE 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN4	NP_001163080.1	RPN5	<95..384	CDD:227403	70/328 (21%)
		PCI	271..369	CDD:279707	25/103 (24%)
RPN5	NP_010134.1	RPN5	5..445	CDD:227403	94/434 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157343477
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840