DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN4 and Rpn5

DIOPT Version :9

Sequence 1:NP_001163080.1 Gene:CSN4 / 35759 FlyBaseID:FBgn0027054 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_649588.1 Gene:Rpn5 / 40717 FlyBaseID:FBgn0028690 Length:502 Species:Drosophila melanogaster


Alignment Length:467 Identity:97/467 - (20%)
Similarity:189/467 - (40%) Gaps:103/467 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KDQADKYRQLLKTVL-----TNTGQELIDGLRLFVEAI------------VNEHVSLVISR---- 70
            |...|.:.:.::.:|     |..|.:::...|:.| ||            :||:|||::.|    
  Fly    34 KKNPDAFHEAIEMMLQLEKQTRLGADMVSCSRVLV-AICQICFDASNWNALNEYVSLLVRRRSQL 97

  Fly    71 -----QILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQWRDA 130
                 :::.:..:.:.|.||..:|:....||..|....|..|.:.|.:...||:|.|.:.....|
  Fly    98 KQAVVKMIQECVTYVDKTPDKETKLKLIDTLRSVTEGKIYVEIERARLTKILADIKEADGDVAGA 162

  Fly   131 ATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETNSEELQVLYK 195
            |||:..:.:||.......| |:...|:..||.|...|.|..::...:.|:...:..::. .:..|
  Fly   163 ATVMEELQVETYGSMDKRE-KVELILEQMRLCLLKEDYVSTQIIAKKISIKFFDDPAQH-DLKLK 225

  Fly   196 VCYARV-LDYRRKFIEAAQRYNELSY--RK-----IVDQG------------------------- 227
            ..|..: |:....|:..::.|..::.  ||     .||..                         
  Fly   226 FYYLMIQLNRDTSFLNTSRHYQAIAEPPRKKTGLTPVDSAASTDEQKKKDDDKKKKEEDDKDKKP 290

  Fly   228 --------------ERMTALKKALICT----VLASAGQQRSRMLATLFKDERCQHLPAYGILEKM 274
                          |:...|.:.|:|.    |||....::|.|:|.|.|:::.:.:|||..:.::
  Fly   291 EVATEAEVEIELTEEQKKELTEKLVCAVLYCVLAPFDNEQSDMMAHLSKNKKLEEVPAYKEILRL 355

  Fly   275 YLERIIRRSELQEFEA-------LLQDHQ--KAATSDG----SSILDRAVFEHNLLSASKLYNNI 326
            ::.:     ||..|:.       :|.:::  |.:|..|    :.:.||.: |||:...:..|:.:
  Fly   356 FMSK-----ELINFDTFNADFGLVLAENEMFKDSTKHGKKCITELKDRLI-EHNIRIIAMYYSRL 414

  Fly   327 TFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHFENR----ELLPQWDRQIQSLCYQ 387
            ....:..||::|..:.|:..|::.....:...||:.:.|::|..:    ::|..|...:..|...
  Fly   415 HLARMSELLNLPTSRCEEYLSKLANTDTIRVKIDRPAGIIYFTQKKSASDILNNWATDVNQLMSL 479

  Fly   388 VNSIIEKISVAE 399
            ||.....|:..|
  Fly   480 VNKTCHLINKEE 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN4NP_001163080.1 RPN5 <95..384 CDD:227403 73/356 (21%)
PCI 271..369 CDD:279707 21/110 (19%)
Rpn5NP_649588.1 RPN5 13..496 CDD:227403 97/467 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447373
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10855
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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