DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN4 and CSN4

DIOPT Version :10

Sequence 1:NP_477444.1 Gene:CSN4 / 35759 FlyBaseID:FBgn0027054 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_318948.4 Gene:CSN4 / 1279253 VectorBaseID:AGAMI1_001553 Length:409 Species:Anopheles gambiae


Alignment Length:397 Identity:316/397 - (79%)
Similarity:353/397 - (88%) Gaps:0/397 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISTAALRSQLMGLINFTGTHKDQADKYRQLLKTVLTNTGQELIDGLRLFVEAIVNEHVSLVISRQ 71
            |||:.||:||:.|.|.:|.||:|.||||.||..:|.|||.||:|.|:||:|||:|||||||||||
Mosquito     3 ISTSVLRTQLVALTNSSGIHKEQVDKYRSLLDQILLNTGNELVDTLKLFIEAILNEHVSLVISRQ 67

  Fly    72 ILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQQWRDAATVLVG 136
            :|:||.:.|:|||||:||.::||||:||.|||||||||||.||.|||.||||||.|::||.||.|
Mosquito    68 LLSDVSTHLTKLPDDISKSVAHFTLDKVQPRVISFEEQVACIRQHLAQIYERNQNWKEAANVLGG 132

  Fly   137 IPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAETNSEELQVLYKVCYARV 201
            ||||||||.|.::.||.||||||||||||.|.||||.||||||:|||:|..|:||:|||||||||
Mosquito   133 IPLETGQKPYPLDYKLETYLKIARLYLEDEDPVQAEAFINRASILQADTKDEKLQILYKVCYARV 197

  Fly   202 LDYRRKFIEAAQRYNELSYRKIVDQGERMTALKKALICTVLASAGQQRSRMLATLFKDERCQHLP 266
            ||||||||||||||||||||.|||:||||||||||||||||||||||||||||||||||||||||
Mosquito   198 LDYRRKFIEAAQRYNELSYRTIVDEGERMTALKKALICTVLASAGQQRSRMLATLFKDERCQHLP 262

  Fly   267 AYGILEKMYLERIIRRSELQEFEALLQDHQKAATSDGSSILDRAVFEHNLLSASKLYNNITFEEL 331
            ||.|||||||:||||||||||||||||.||||:|.||||||||||||||||||||||||||||||
Mosquito   263 AYSILEKMYLDRIIRRSELQEFEALLQMHQKASTLDGSSILDRAVFEHNLLSASKLYNNITFEEL 327

  Fly   332 GALLDIPAVKAEKIASQMITEGRMNGHIDQISAIVHFENRELLPQWDRQIQSLCYQVNSIIEKIS 396
            ||||:||..|||:|||||||||||||:||||..:||||.||:|||||:|||.||||:|.:||||.
Mosquito   328 GALLEIPPPKAERIASQMITEGRMNGYIDQIDGVVHFETREVLPQWDKQIQGLCYQLNGLIEKIG 392

  Fly   397 VAEPDWM 403
            .||||||
Mosquito   393 AAEPDWM 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN4NP_477444.1 RPN5 <95..384 CDD:227403 245/288 (85%)
PCI 271..369 CDD:460195 85/97 (88%)
CSN4_RPN5_eIF3a 372..>403 CDD:375846 22/30 (73%)
CSN4XP_318948.4 None

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