DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8726 and nish-1

DIOPT Version :9

Sequence 1:NP_610341.2 Gene:CG8726 / 35758 FlyBaseID:FBgn0033244 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_502016.2 Gene:nish-1 / 177981 WormBaseID:WBGene00008750 Length:497 Species:Caenorhabditis elegans


Alignment Length:531 Identity:110/531 - (20%)
Similarity:198/531 - (37%) Gaps:139/531 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 WTVLRRYNDFDRLDKSLRVSGIELPLPRKRIFGNMRPEFIAERKQALQEYINAVLMNPIL----- 109
            |||.|||:|||..|....:...:..||.|:..||...|||.||:..|::|:.|:|...:.     
 Worm    46 WTVERRYSDFDAYDVHRFLDRKKSFLPPKKRLGNKDLEFIEERRLELEKYVRALLELEVWYQKQK 110

  Fly   110 -ASSLP--AKRFVDPESYSQSFHDHAVQNAMLCLRNDTTWSLGGSMGAIGW----RLRKHYFKVT 167
             ..|||  ..:|.|       ||.:.:.:.:    :|.:..| |::|. ||    :....||:.|
 Worm   111 NVHSLPLITAKFFD-------FHQYEIHSIV----DDLSLRL-GNLGD-GWLESSQTSPKYFEFT 162

  Fly   168 ----------TKPPEKSS-NKQLVKSGSQTHQSKHFA-----------AGSSNGSGHSIDAGTLD 210
                      .:.||.:: :..:|.....|....|..           .|:||...:|:|. :|.
 Worm   163 PIELHAITERLRLPEPTAPDVNMVADIGNTIDFLHRVRALKIRGQKGYVGTSNIVWNSLDM-SLY 226

  Fly   211 PGSEVVAEWLEYGPDKFIDEKEIGGIMKSLMGLQHPHIEPVLLAAHTENGCLVIRKFHKHGTLKD 275
            ....:.|.|:...     |...|.|| ||:..                    .:|:...|.::|.
 Worm   227 FCKGLKALWIADS-----DVCRINGI-KSIRE--------------------TLRRLVVHYSMKK 265

  Fly   276 VLCMAANPKNTFLSKYGNPKGRTALSMKQVATYGKQILEALIFLHSKGYAYGHLHSGNIVIVDDC 340
            :..:..:.::.          .|.:.::::.|:  :.||.:           .|....|...|:.
 Worm   266 IKDLLFDEEDL----------ETGMLVEEMDTW--KCLEEV-----------DLSFNEIKCFDES 307

  Fly   341 VKLLDIENFLLGVPAFYRPFFMQHSKIHAIETIDVYCFGHVLFEMAMGYPLQESVVRQITECPEA 405
            :|||. |..:|.|         .::.|..|.:  ...|...|.|:    .|..:.:.:|....|.
 Worm   308 MKLLP-EVRVLNV---------SYNSITEIGS--NLAFLSSLTEL----DLSNNTLTKIDGWNEK 356

  Fly   406 LKCLLESILSKEACKAGLPTLEQL--LGHRFFLQYA-----------STESAGAAANAE------ 451
            |..:.:.|||:.|       :|.|  ||..:.|:|.           :.:..|.....|      
 Worm   357 LGNIKKLILSENA-------IEDLSGLGKLYSLEYLDAKGNNIQNLDAVQGIGKLPCLEILLLRD 414

  Fly   452 KPYFKLSLNAKELLKQAAIKSENRLRDEQKSVKNQKRIVRVQELMSSEEEKRKSKQKAKLEHKQS 516
            .|..||.....::|:....:|.....|.::....:...|||:..:...:|:::.::|.:.|..:.
 Worm   415 NPIRKLVEYRTKVLELFGERSSELKLDGRRPEARELDTVRVRMALRKAKEEKEEREKKRRERIEE 479

  Fly   517 KLKQQSSIQTN 527
            :::..|....|
 Worm   480 RIRYISGEDVN 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8726NP_610341.2 PX_MONaKA 13..132 CDD:132781 31/89 (35%)
PKc 237..432 CDD:270622 34/196 (17%)
nish-1NP_502016.2 PX_domain 18..137 CDD:383026 31/101 (31%)
LRR <289..423 CDD:227223 35/167 (21%)
leucine-rich repeat 291..313 CDD:275380 8/33 (24%)
leucine-rich repeat 314..336 CDD:275380 5/32 (16%)
leucine-rich repeat 337..359 CDD:275380 6/25 (24%)
leucine-rich repeat 360..381 CDD:275380 8/27 (30%)
leucine-rich repeat 382..406 CDD:275380 3/23 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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