DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment nito and RS41

DIOPT Version :9

Sequence 1:	NP_001286174.1	Gene:	nito / 35756	FlyBaseID:	FBgn0027548	Length:	793	Species:	Drosophila melanogaster
Sequence 2:	NP_200017.2	Gene:	RS41 / 835279	AraportID:	AT5G52040	Length:	357	Species:	Arabidopsis thaliana

Alignment Length:	370	Identity:	89/370 - (24%)
Similarity:	134/370 - (36%)	Gaps:	105/370 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   314 RTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFV--------------RYQNL 364
            :.:|.||.|....:.:|.|:|.|||.|:.:|:|     .|.||.::              |::..
plant     2 KPVFCGNFEYDARESDLERLFRKYGKVERVDMK-----AGFAFVYMEDERDAEDAIRALDRFEYG 61

  Fly   365 DMAHRAKIEL-------SGQYIGKFQCKIGYGKVTPATRMWIGGLGAWTSVTQ-LEREFDRFGAI 421
            ....|.::|.       :|:..|..:...|   :.|:..:::....|..:.|: |||.|:.:|.|
plant    62 RTGRRLRVEWTKNDRGGAGRSGGSRRSSSG---LRPSKTLFVINFDAQNTRTRDLERHFEPYGKI 123

  Fly   422 KKIEYQKGEPYAYIQYETVEAATAAVKEMRGFPL----------------------------GGP 458
            ..:..::.  :|:||||..|.||.|:.......|                            ..|
plant   124 VNVRIRRN--FAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSP 186

  Fly   459 ERRLRT-----------DFAELPGATPAAPFKS-SKPPYD---ESALEYRRPEYDPYYEESAAYA 508
            :||.|:           |:..  ||:|.|..:. :.|.|.   .|...|:|....|.|:......
plant   187 DRRRRSPSPYRRERGSPDYGR--GASPVAHKRERTSPDYGRGRRSPSPYKRARLSPDYKRDDRRR 249

  Fly   509 PRGGYSPYPPRGGYRGRGGYRGRGRGMYHYHNDVHRPPHPGSLAGSSSSVPPPGGVEDEWRRPPG 573
            .|   ...|..|..|.|...:|||..         |.|.|......|.| |||.....|.|.||
plant   250 ER---VASPENGAVRNRSPRKGRGES---------RSPPPYEKRRESRS-PPPYEKRRESRSPP- 300

  Fly   574 ESYDRGARSSSREPGVERSRSRSPLK----RARSPGSDSDTSTRR 614
             .|::..         |||||||...    :..|||...:....|
plant   301 -PYEKRR---------ERSRSRSKSSPENGQVESPGQIMEVEAGR 335

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
nito	NP_001286174.1	RRM	<56..>223	CDD:223796
		RRM1_Spen	98..175	CDD:240754
		RRM2_Spen	312..390	CDD:240755	22/96 (23%)
		RRM3_Spen	397..467	CDD:240756	23/109 (21%)
		SPOC	630..789	CDD:311609
RS41	NP_200017.2	RRM1_AtRSp31_like	2..73	CDD:409680	19/75 (25%)
		RRM	9..289	CDD:223796	68/304 (22%)
		RRM2_AtRSp31_like	97..166	CDD:409899	18/70 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	1.870