Protein Alignment nito and AT4G12640

DIOPT Version :9

• Sequence 1: NP_001286174.1
• Gene: nito / 35756
• FlyBaseID: FBgn0027548
• Length: 793
• Species: Drosophila melanogaster
• Sequence 2: NP_193001.2
• Gene: AT4G12640 / 826877
• AraportID: AT4G12640
• Length: 823
• Species: Arabidopsis thaliana
• Alignment Length: 598
• Identity: 130/598 - (21%)
• Similarity: 193/598 - (32%)
• Gaps: 185/598 - (30%)

  Fly   313 TRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKIELSGQ 377
            :|.|:.|||...|.:.||...|.::|.::.:..:     .|.::|||.:.:.:.|..|...|.|.
plant    22 SRHLWVGNLPHGILERELADRFLRFGELESLAFQ-----PGRSYAFVNFNHDEDAFAAIESLQGF 81

  Fly   378 YIGKFQCKIGYGK---------------------------------------------------- 390
            .:.....:|.:.|
plant    82 PLSGNPLRIEFAKAEKSSTGSRTDDIYRHDEQRSAARGSSFVQRDSRMRYESPDTYSKSKMNDRN 146

  Fly   391 VTPATRMWIGGLGAWTSVTQ--LEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEMRGF 453
            ..|:..::| |..|...|..  |...|..||.|.|:....|..||::|:..:.||..|.:.::|.
plant   147 AEPSEVLYI-GFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKESLQGK 210

  Fly   454 PLGGPERRLRTDFAEL------PGATPAAPFKSSKPPY--------DESALEYRR-------PEY 497
            ..|.|  |:...||:.      .|..|:.  :|..|||        .|..|:.|.       |..
plant   211 LFGNP--RVHICFAKSEPSSSGSGRGPSG--RSLSPPYRSVDRLGSSEGYLQDRNYGSISRIPSV 271

  Fly   498 -DPYYEESAAYAPRGGYSPYPPRGGYRGRGGYRGRGRGMYHYHNDVHR-PPHPGSLAGSSSSVP- 559
             :|:|.|........||.....|......|...||.|..:.:..|:|. ...||.:..|....|
plant   272 REPHYIEDRDLEDSEGYIFNRKRDSSSDGGPAYGRSRSTHRFPQDMHEYHGSPGEMGTSFRDNPH 336

  Fly   560 ----PPGGVEDEWRRPPGESYDR-----GARSSSRE---PGVERS---RSRSPLKRARSPGSDSD 609
                .....|:.|..|..:.|.:     ..|||..|   ||.:.|   :.|.|..||.:..|..|
plant   337 RFQTRSSEYEEPWDLPEDDYYYQEIKRLKTRSSQPERQLPGHQLSGIEQERRPFSRASADFSPKD 401

  Fly   610 TSTR---------------------RNDALAS--------------ASTVPDVARKCSTV----- 634
            ...|                     ||...:|              .|.||:..|....:
plant   402 AFERNYEAGQLRYNQTVEQPLNLAIRNGDKSSLREPHEELMGGYPLPSVVPERKRYTPELNRPSL 466

  Fly   635 ----WTGAL------ILKSSLFPAKFHLTDGDTDIVESLMRDEEGKHNLRITQRLRLDPPKLDDV 689
                |.|.:      |.::..||         ...|..:|..|    .|..|.|..||.     :
plant   467 KDWNWEGTIAKGGNPICRAKCFP---------VGKVMDMMLPE----FLDCTARTGLDM-----L 513

  Fly   690 QKRIASSSSHAIFMGLAGSTNDTNCDDASVQTRPLRNLVSYLKQKEAAGVISLLNKETEATGVLY 754
            .|....||...:...:.||..|....|         ..:.||::|:.|.|..|     :.|..|:
plant   514 AKHYYQSSKAWVVFFVPGSDADIVFYD---------EFMHYLEEKQRAAVSKL-----DDTTTLF 564

  Fly   755 AFPPCDFSTELLK 767
            ..||.|||.::||
plant   565 LVPPSDFSEKVLK 577

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nito	NP_001286174.1	RRM	<56..>223	CDD:223796
		RRM1_Spen	98..175	CDD:240754
		RRM2_Spen	312..390	CDD:240755	19/76 (25%)
		RRM3_Spen	397..467	CDD:240756	21/71 (30%)
		SPOC	630..789	CDD:311609	35/153 (23%)
AT4G12640	NP_193001.2	RRM3_Spen	25..94	CDD:240756	18/73 (25%)
		RRM_SF	153..223	CDD:302621	22/72 (31%)
		SPOC	471..567	CDD:285043	28/127 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D367857at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm3486
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010