Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001078046.1 | Gene: | FPA / 818942 | AraportID: | AT2G43410 | Length: | 901 | Species: | Arabidopsis thaliana |
Alignment Length: | 627 | Identity: | 140/627 - (22%) |
---|---|---|---|
Similarity: | 205/627 - (32%) | Gaps: | 221/627 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 307 EDDPLSTRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAK 371
Fly 372 IELSGQYIGKFQCKIGYGK-VTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYI 435
Fly 436 QYETVEAATAAVKEMRGFPLGGPERRLRTDFAELPGATPAAPFKSSKPPYDESALEY-------- 492
Fly 493 RRPEYDPYYEESAAYAPRGGYSP-------YPPRG-----------------------GYRGRG- 526
Fly 527 ----------------GYRGR----GRGMYHYHNDVHRP-------------------------- 545
Fly 546 --PHPGSLAGSSSSVPPPG---------------GVEDEWRRPPGESYDRGARSSSREPGVERSR 593
Fly 594 SRSPLKRARSPGSDSDTSTRRNDALASASTVPDVARKCSTVWTG---ALILKSSLFPAKFHLTDG 655
Fly 656 DTDIVESLMRDEEGKHNLRITQRLRLDPPKLDDVQKRIASSS------SHAIFMGLAGST---ND 711
Fly 712 TNC-----------------------------DDASVQTRPLRNLVSYLKQKEAAGVISLLNKET 747
Fly 748 EATGVLYAFPPCDFSTELLKRTCHSLTEEGLKEDHLVIVVVR 789 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | |
RRM1_Spen | 98..175 | CDD:240754 | |||
RRM2_Spen | 312..390 | CDD:240755 | 23/77 (30%) | ||
RRM3_Spen | 397..467 | CDD:240756 | 26/69 (38%) | ||
SPOC | 630..789 | CDD:311609 | 42/199 (21%) | ||
FPA | NP_001078046.1 | RRM3_Spen | 20..89 | CDD:240756 | 23/73 (32%) |
RRM3_Spen | 97..165 | CDD:240756 | 27/81 (33%) | ||
RRM3_Spen | 208..280 | CDD:240756 | 9/71 (13%) | ||
SPOC | 441..537 | CDD:285043 | 18/104 (17%) | ||
YppG | 761..>830 | CDD:290883 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm3486 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |