Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036020322.1 | Gene: | Sfpq / 71514 | MGIID: | 1918764 | Length: | 788 | Species: | Mus musculus |
Alignment Length: | 562 | Identity: | 127/562 - (22%) |
---|---|---|---|
Similarity: | 182/562 - (32%) | Gaps: | 162/562 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 HRDGAGADRITIKIHNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPERMRR 68
Fly 69 RLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLCVSALPPKAPDDFIEETLYREYKKFGDFSVRL 133
Fly 134 AHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPVYKSTT--------RPEYRPRGHSM 190
Fly 191 S----PPDYERYHYSRSPMGQGVPLDHRRPP-----IDPYDRYGP-------------------P 227
Fly 228 HMHPHAVHPRDYRPLHHDYPHPPRGPPLHRGGHPHHLHGHAPPHQYAPMRPLAPRPHAPYEKPES 292
Fly 293 KKDKFPNYLHHVQPEDDPLSTR--TLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNA 355
Fly 356 FAFVRYQNLDMAHRAKIELSGQYIGKFQCKIGYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGA 420
Fly 421 IKKIEYQKGEPYAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDFAELPGATPA------APFK 479
Fly 480 SSKPPY-----------DESALEYRRPEYDPYYEESAAYAPR 510 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | 33/183 (18%) |
RRM1_Spen | 98..175 | CDD:240754 | 10/76 (13%) | ||
RRM2_Spen | 312..390 | CDD:240755 | 24/79 (30%) | ||
RRM3_Spen | 397..467 | CDD:240756 | 11/69 (16%) | ||
SPOC | 630..789 | CDD:311609 | |||
Sfpq | XP_036020322.1 | RRM1_PSF | 377..447 | CDD:410000 | 23/74 (31%) |
RRM2_PSF | 453..532 | CDD:410003 | 18/102 (18%) | ||
NOPS_PSF | 523..619 | CDD:240583 | 8/38 (21%) | ||
PRK12704 | 567..>675 | CDD:237177 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167844452 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |