Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003749428.1 | Gene: | Rbm15 / 684233 | RGDID: | 1592713 | Length: | 962 | Species: | Rattus norvegicus |
Alignment Length: | 966 | Identity: | 334/966 - (34%) |
---|---|---|---|
Similarity: | 446/966 - (46%) | Gaps: | 254/966 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 RSASRSPGPASRS-----SLSRNSRSMGRGYDNGSGVPGDSPERLSPERMRR--RLDRSPSR--- 76
Fly 77 ----------------YGSP---------HREPYMRGPPPAERPAG-------------YKVLCV 103
Fly 104 SALPPKAPDDFIEETLYREYKKFGDFSVRLAH-----DLDERVAYVCFRTPEDAREAKHHKPRLI 163
Fly 164 IYDKMAIVEPVYKSTTRPEYRPRGHSMSPPDYERYHYSRSPMGQGVPLDHRRPPIDPYDRYGPPH 228
Fly 229 MHP--HAVHPRDYR----PLHHDYPHPPRGPPLHRGGHPHHLHGHAPPHQYAPMRP---LAPR-- 282
Fly 283 ---PHAPYEKPESKKDKFPNYLHHVQPEDDPLSTRTLFAGNLEVTIADDELRRIFGKYGVVDDID 344
Fly 345 IKRPPPGTGNAFAFVRYQNLDMAHRAKIELSGQYIGKFQCKIGYGKVTPATRMWIGGLGAWTSVT 409
Fly 410 QLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDFAE------ 468
Fly 469 ------LP-----------GATPAAPFKSSK---PPYDESALEYRRPEYD------------PYY 501
Fly 502 EESA--------AYAP-------RGGYS----------------------PYPPRGGYRGRGGYR 529
Fly 530 GRGRGMYH-----------------YHNDVHRP--------PHP-----GSLAGSSSSVPPPGGV 564
Fly 565 EDEWRRPPGESYDRGARSSSREPGVERSRSRSPLKRA-RSPGSDSDTST---------RRNDALA 619
Fly 620 SASTVPDVAR--KCSTVWTGALILKSSLFPAKFHLTDGDTDIVESLMRDEE--GK-HNLRITQRL 679
Fly 680 RLDPPKLDDVQKRI--ASSSSHAIFMGLAG------STNDTNCDDASVQTRPLRNLVSYLKQKEA 736
Fly 737 AGVISLL---NKETEATGVLYAFPPCDFSTELLKRTCHSLTEEGLKEDHLVIVVVR 789 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | 68/214 (32%) |
RRM1_Spen | 98..175 | CDD:240754 | 37/81 (46%) | ||
RRM2_Spen | 312..390 | CDD:240755 | 37/77 (48%) | ||
RRM3_Spen | 397..467 | CDD:240756 | 43/69 (62%) | ||
SPOC | 630..789 | CDD:311609 | 80/172 (47%) | ||
Rbm15 | XP_003749428.1 | RRM1_RBM15 | 168..250 | CDD:240997 | 37/81 (46%) |
RRM2_RBM15 | 366..452 | CDD:240999 | 42/85 (49%) | ||
RRM3_RBM15 | 455..527 | CDD:241001 | 45/71 (63%) | ||
SPOC | 789..925 | CDD:285043 | 67/135 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166347823 | |
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4792 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0112 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 386 | 1.000 | Inparanoid score | I1952 |
OMA | 1 | 1.010 | - | - | QHG48807 | |
OrthoDB | 1 | 1.010 | - | - | D215960at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003417 | |
OrthoInspector | 1 | 1.000 | - | - | otm45768 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105436 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23189 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2309 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.810 |