Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_005617.2 | Gene: | SRSF4 / 6429 | HGNCID: | 10786 | Length: | 494 | Species: | Homo sapiens |
Alignment Length: | 345 | Identity: | 78/345 - (22%) |
---|---|---|---|
Similarity: | 124/345 - (35%) | Gaps: | 103/345 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 316 LFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAKIELSGQYI- 379
Fly 380 ---------------GKF-QCKIGYG-------KVTPAT----RMWIGGLGAWTSVTQLEREFDR 417
Fly 418 FGAIKKIEYQKG-EPYAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDFAELPGATPAAPFKSS 481
Fly 482 KPPYDESALEYRRPEYDPYYEESAAYAPRGGYSPYPPRGGYRGRGGYRGRGRGMYHYHNDVHRPP 546
Fly 547 HPGSLAGSSSSVPPPGGVEDEWRRPPGESYDR-GARSSSREPGVERSRSRSPLKRARSPGSDSDT 610
Fly 611 STRRNDALASASTVPDVARK 630 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | |
RRM1_Spen | 98..175 | CDD:240754 | |||
RRM2_Spen | 312..390 | CDD:240755 | 21/97 (22%) | ||
RRM3_Spen | 397..467 | CDD:240756 | 13/70 (19%) | ||
SPOC | 630..789 | CDD:311609 | 0/1 (0%) | ||
SRSF4 | NP_005617.2 | RRM1_SRSF4_like | 3..72 | CDD:240783 | 17/74 (23%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 72..95 | 4/22 (18%) | |||
RRM2_SRSF4_like | 104..175 | CDD:241044 | 13/70 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 169..494 | 43/173 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |