| Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006539132.1 | Gene: | Spen / 56381 | MGIID: | 1891706 | Length: | 3644 | Species: | Mus musculus |
| Alignment Length: | 759 | Identity: | 174/759 - (22%) |
|---|---|---|---|
| Similarity: | 251/759 - (33%) | Gaps: | 310/759 - (40%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 HRDGAGADRITIKI------HNMKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLS 62
Fly 63 PERMRRRLDRSPSRYGSPHR----------------------------EPYMRGPPPAERPA--- 96
Fly 97 ---------------GYKVLCVSALPPKAPDDFIEETLYREYKKFGDF-SVRLAHDLDERVAYVC 145
Fly 146 FRTPEDAREA-KHHKPRLIIYDKMAIVEPVYKST-TRPEYRPRGHSMSPPDYERYHYSRSPMGQG 208
Fly 209 VPLDHRRPPIDPYDRYGPPHMHPHAVHPRDYRPLHHDYPHPPRGPPLHRGGHPHHLHGHAPPHQY 273
Fly 274 APMRPLAPRPHAPYEKPESKKDKFPNYLHHVQPEDDPLSTRTLFAGNLEVTIADDELRRIFGKYG 338
Fly 339 VVDDIDIKR----PPPGTGNAFAFVRYQNLDMAHRAKIELSGQYIGKFQCKIGYGKVTPATRMWI 399
Fly 400 GGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEMRGFPLGGPERRLRT 464
Fly 465 DFAELPGATPAAPFKSSKPPYDESALEY----------RRPEYDPYYEESAAYAPRGGY------ 513
Fly 514 --SPYPPRGGYRGRGGYRGRGRGMYHYHNDVHRPPHPGSLAGSSSSVPPPGGVE--DEWRRPPGE 574
Fly 575 SYD---------------------------------------RGARSSSREPGVERSRSRSPLKR 600
Fly 601 ARSPG----------SDSDTSTRRNDALASASTVPDVARKCSTV 634 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | 50/215 (23%) |
| RRM1_Spen | 98..175 | CDD:240754 | 23/78 (29%) | ||
| RRM2_Spen | 312..390 | CDD:240755 | 30/81 (37%) | ||
| RRM3_Spen | 397..467 | CDD:240756 | 23/69 (33%) | ||
| SPOC | 630..789 | CDD:311609 | 3/5 (60%) | ||
| Spen | XP_006539132.1 | RRM1_SHARP | 7..81 | CDD:240794 | |
| U2AF_lg | 128..596 | CDD:273727 | 128/545 (23%) | ||
| RRM2_SHARP | 338..411 | CDD:240795 | 24/75 (32%) | ||
| RRM3_SHARP | 438..511 | CDD:240796 | 29/78 (37%) | ||
| RRM4_SHARP | 512..588 | CDD:240797 | 25/77 (32%) | ||
| PTZ00121 | <635..1272 | CDD:173412 | 41/174 (24%) | ||
| PHA03247 | <1629..2063 | CDD:223021 | |||
| PHA03247 | <2122..2642 | CDD:223021 | |||
| Collagen_mid | <2641..>2722 | CDD:374271 | |||
| PHA03247 | <2949..3474 | CDD:223021 | |||
| SPOC | 3483..3642 | CDD:369497 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0112 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D367857at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.820 | |||||