Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_030107241.1 | Gene: | Nono / 53610 | MGIID: | 1855692 | Length: | 482 | Species: | Mus musculus |
Alignment Length: | 211 | Identity: | 52/211 - (24%) |
---|---|---|---|
Similarity: | 90/211 - (42%) | Gaps: | 28/211 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 248 HPPRGPPLHRGGHPHHLHGHAPPH----QYAPMRPLAPRPHAPYEKPESKKDKFPNYLHHV-QPE 307
Fly 308 DDPLSTRT-LFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAK 371
Fly 372 IELSGQYIGKFQCKIGYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKK---IEYQKGEP-- 431
Fly 432 YAYIQYETVEAATAAV 447 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | |
RRM1_Spen | 98..175 | CDD:240754 | |||
RRM2_Spen | 312..390 | CDD:240755 | 23/78 (29%) | ||
RRM3_Spen | 397..467 | CDD:240756 | 13/56 (23%) | ||
SPOC | 630..789 | CDD:311609 | |||
Nono | XP_030107241.1 | RRM1_p54nrb | 75..145 | CDD:241032 | 23/74 (31%) |
RRM_SF | 151..230 | CDD:388407 | 13/57 (23%) | ||
NOPS_p54nrb_PSF_PSPC1 | 221..313 | CDD:240581 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167844447 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |