| Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001013961.1 | Gene: | Raver1 / 298705 | RGDID: | 1359190 | Length: | 748 | Species: | Rattus norvegicus |
| Alignment Length: | 730 | Identity: | 145/730 - (19%) |
|---|---|---|---|
| Similarity: | 215/730 - (29%) | Gaps: | 234/730 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 205 MGQGVPLDHRRPPIDP-----------YDRYGP----PHMHPHAVHPRDYRPLHH-DYPHPPRGP 253
Fly 254 PLHRGGHPHHLHGHAPPHQYAPMRPLAPRPHAPYEKPESKKDKFP-----------------NYL 301
Fly 302 HHVQPEDDPLSTR------TLFAGNLEVTIAD---DELRRIFGKYGVVDDIDIKRPPPGTGNAFA 357
Fly 358 FVRYQNLDMAHRAKIELSGQYIGKFQCKIGY---GKVTPA---TRMWIGGLGAWTSVTQLEREFD 416
Fly 417 RFGAIKK-------------IEYQKGE--PYAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDF 466
Fly 467 AE--------------------------LP----------------------------------- 470
Fly 471 -GATPAAPF-----------------------KSSKPP--YDESALEYRRPEYDPYYEESAAYAP 509
Fly 510 RGGYSP-YPPRGG--------YRGRGGYRGRGRGMYHYHNDVHRPPHPGSLAGS--------SSS 557
Fly 558 VPPPGGVE------DEWRRP-----------PGESY----DRGARSSSREPGVERSRSRSPLKRA 601
Fly 602 RSPGSDSDTSTRRNDALASASTVPDVARKCSTVWTGALILKSSLFPAKFHLTDGDTDIVESLMRD 666
Fly 667 EEGKHNLRI--TQRLRLDPPKLDDVQKRIASSSSHAIFMGLAGSTND--TNCDDASVQTRPLRNL 727
Fly 728 VSYLKQKEAAGVISL 742 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | 7/28 (25%) |
| RRM1_Spen | 98..175 | CDD:240754 | |||
| RRM2_Spen | 312..390 | CDD:240755 | 21/89 (24%) | ||
| RRM3_Spen | 397..467 | CDD:240756 | 20/84 (24%) | ||
| SPOC | 630..789 | CDD:311609 | 22/117 (19%) | ||
| Raver1 | NP_001013961.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..42 | 11/41 (27%) | |
| Nuclear localization signal. /evidence=ECO:0000255 | 45..60 | 4/18 (22%) | |||
| RRM1_RAVER1 | 59..129 | CDD:241107 | 13/81 (16%) | ||
| RRM_SF | 133..209 | CDD:302621 | 20/77 (26%) | ||
| RRM3_RAVER1 | 219..306 | CDD:241111 | 22/96 (23%) | ||
| Interaction with PTBP1. /evidence=ECO:0000250 | 307..401 | 10/93 (11%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 390..505 | 27/114 (24%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 525..647 | 25/134 (19%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 672..731 | 3/17 (18%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 743..746 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166347824 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.930 | |||||