Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_741446.1 | Gene: | rsp-6 / 177566 | WormBaseID: | WBGene00004703 | Length: | 179 | Species: | Caenorhabditis elegans |
Alignment Length: | 231 | Identity: | 64/231 - (27%) |
---|---|---|---|
Similarity: | 91/231 - (39%) | Gaps: | 61/231 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 396 RMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEP-YAYIQYETVEAATAAVKEMRGFPLGGPE 459
Fly 460 RRLRTDFAELPGATPAAPFKSSKPPYDESALEYRRPEYDPYYEESAAYAPRGGYSPYPPRGGYRG 524
Fly 525 RGGYRGRGRGMYHYHNDVHRPPHPGSLAGSSSSVPPPGGVEDEWRRPPGESYDRG---ARSSSRE 586
Fly 587 PGVERSRSRSPLKRARSPGSDSDTSTRRNDALASAS 622 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | |
RRM1_Spen | 98..175 | CDD:240754 | |||
RRM2_Spen | 312..390 | CDD:240755 | |||
RRM3_Spen | 397..467 | CDD:240756 | 22/70 (31%) | ||
SPOC | 630..789 | CDD:311609 | |||
rsp-6 | NP_741446.1 | RRM | <2..>75 | CDD:223796 | 22/70 (31%) |
RRM_SRSF3_like | 4..75 | CDD:240819 | 22/70 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |