DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nito and nito

DIOPT Version :10

Sequence 1:NP_610339.1 Gene:nito / 35756 FlyBaseID:FBgn0027548 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_314009.5 Gene:nito / 1274805 VectorBaseID:AGAMI1_009835 Length:790 Species:Anopheles gambiae


Alignment Length:838 Identity:547/838 - (65%)
Similarity:630/838 - (75%) Gaps:93/838 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSHRDGAGADRITIKIHNMKRSASRSPGPAS--RSSLSRNSRSMGRGYDNGSGVPGDSPERLSP 63
            |||.| .:..||||:|||||||||||...|.|  |||:.|        ||:      .|.||::|
Mosquito     1 MSSIR-SSERDRITVKIHNMKRSASRESPPRSKRRSSIGR--------YDD------SSDERVTP 50

  Fly    64 ERMRRRLDRSPS---RYGSPHREPYMRGPPPAE--------RPAGYKVLCVSALPPKAPDDFIEE 117
            :|||||:.||||   ||.||||:.|......|:        ....|||||||||.|||.::||:|
Mosquito    51 DRMRRRVARSPSPRARYASPHRDEYSSSRSRADIGSSGGGSERYSYKVLCVSALHPKASEEFIKE 115

  Fly   118 TLYREYKKFGDFSVRLAHDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPVYKSTTRPE 182
            |||||||||||||:|::||||||:||||||||||||||||.|.|:|::||:|:|||||:|:....
Mosquito   116 TLYREYKKFGDFSIRISHDLDERLAYVCFRTPEDAREAKHAKSRIILHDKVALVEPVYESSKSES 180

  Fly   183 YRPRGHSMSPPDYERYHYSRSPMGQGV-PLDHRRPP-IDPYDRYGPP---HMHPHAVHPRDYR-P 241
            || |..|.|||:|:|::|:|||   || |.|.|||| ..|||.||||   .||    || |:| |
Mosquito   181 YR-RPRSASPPEYDRHYYARSP---GVPPPDRRRPPEHHPYDGYGPPPGGRMH----HP-DFRPP 236

  Fly   242 LHHDYPHPPRGPPLHRGGHPHHLHGHAPPHQYAPMRPLAPRPHAPYEKPESKKDKFPNYLHHVQP 306
            :||||  .|||||:|..| |.|:|...|.|.|.| ||..|||.||:||.|:|||||||||||:||
Mosquito   237 MHHDY--LPRGPPMHHHG-PPHMHPGPPHHHYMP-RPYMPRPRAPFEKQENKKDKFPNYLHHIQP 297

  Fly   307 EDDPLSTRTLFAGNLEVTIADDELRRIFGKYGVVDDIDIKRPPPGTGNAFAFVRYQNLDMAHRAK 371
            |||||:||||||||||:.|:||||||||||||:|:|||||||.|||||||||||||.||||||||
Mosquito   298 EDDPLATRTLFAGNLEINISDDELRRIFGKYGLVEDIDIKRPAPGTGNAFAFVRYQTLDMAHRAK 362

  Fly   372 IELSGQYIGKFQCKIGYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQ 436
            :||||||||||||||||||.||.||:|:|||||||||||||||||||||||||||.||:..|:|.
Mosquito   363 VELSGQYIGKFQCKIGYGKATPTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYAKGDTQAFIL 427

  Fly   437 YETVEAATAAVKEMRGFPLGGPERRLRTDFAELPGATPAAPFKSSKPPYDESALEYRR-PEYD-- 498
            |::::||||||||||||.||||:||:|.|||: .|..|  ||  :|.|::|...|||| |||:  
Mosquito   428 YDSIDAATAAVKEMRGFALGGPDRRIRIDFAD-NGTVP--PF--AKRPFEEGGGEYRRVPEYEYP 487

  Fly   499 ---PYYEESAAYAPRGGYSPYPPRGGYRGRG------GYRGRGRGMYH--YHNDVHRPPHPGSLA 552
               |.|::.|.....|||.    ...:||||      ||||||.|.:.  :|:|.|||...|.  
Mosquito   488 DGAPPYDDGAPGYGGGGYG----ARSFRGRGSGGSGSGYRGRGGGSFRGGFHHDGHRPAGAGG-- 546

  Fly   553 GSSSSVPP---PGGVEDEWRRPPG------ESYDRGARSSSREP-GVERSRSRSPLKRARSPG-S 606
                  ||   ||| |:|||||||      ..||:..||.|||| |::|||||||  |.|||. |
Mosquito   547 ------PPHHGPGG-EEEWRRPPGGGGGEPGEYDQRRRSGSREPGGIDRSRSRSP--RRRSPADS 602

  Fly   607 DSDTSTRRNDALASASTVPDVARKCSTVWTGALILKSSLFPAKFHLTDGDTDIVESLMRDEEGKH 671
            |||:|||||..|.||.|:.:||||.||||.||||||||||||||||||||.|||:.||:||:|||
Mosquito   603 DSDSSTRRNGVLTSARTLSEVARKSSTVWQGALILKSSLFPAKFHLTDGDADIVDELMKDEDGKH 667

  Fly   672 NLRITQRLRLDPPKLDDVQKRIASSSSHAIFMGLAGSTND-TNCDDASVQTRPLRNLVSYLKQKE 735
            :||||||||||.|||:||||||::|||||||:||.||... ::.||||||||||||||:||||||
Mosquito   668 HLRITQRLRLDQPKLEDVQKRISTSSSHAIFLGLPGSNPAVSSSDDASVQTRPLRNLVTYLKQKE 732

  Fly   736 AAGVISLLNKETEATGVLYAFPPCDFSTELLKRTCHSLTEEGLKEDHLVIVVVRGGTA 793
            |||||||||||||||||||.||||:|||||||||||:|||||||||||||||||||||
Mosquito   733 AAGVISLLNKETEATGVLYTFPPCEFSTELLKRTCHTLTEEGLKEDHLVIVVVRGGTA 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nitoNP_610339.1 RRM1_Spen 98..175 CDD:409749 60/76 (79%)
RRM2_Spen 312..390 CDD:240755 68/77 (88%)
RRM3_Spen 397..468 CDD:409750 54/70 (77%)
SPOC_RBM15-like 634..790 CDD:439207 132/156 (85%)
nitoXP_314009.5 None

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