| Sequence 1: | NP_001286174.1 | Gene: | nito / 35756 | FlyBaseID: | FBgn0027548 | Length: | 793 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_597709.3 | Gene: | RAVER1 / 125950 | HGNCID: | 30296 | Length: | 739 | Species: | Homo sapiens |
| Alignment Length: | 623 | Identity: | 127/623 - (20%) |
|---|---|---|---|
| Similarity: | 173/623 - (27%) | Gaps: | 240/623 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 205 MGQGVPLDHRRPPIDP-----------YDRYGP----PHMHPHAVHPRDYRPLHH-DYPHPPRGP 253
Fly 254 PLHRGGHPHHLHGHAPPHQYAPMRPLAPRPHAPYEKPESKKDKFP-----------------NYL 301
Fly 302 HHVQPEDDPLSTR------TLFAGNLEVTIADDELRRIFGKYGVVDD-IDIKRPPPGTGNAFAFV 359
Fly 360 RYQNLDMAHRAKIELSGQYIGKFQCKIGY---GKVTPA---------TRMWIG---------GLG 403
Fly 404 AWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEMRGFPLGGPERRLRTDFAE 468
Fly 469 --------------------------LP------------------------------------G 471
Fly 472 ATPAAPF-----------------KSSKPP--YDESALEYRRPEYDPYYEESAAYAPRGGYSP-Y 516
Fly 517 PPRGG--------YRGRGGYRGRGRGMYHYHNDVHRPPHPGSLAGS--------SSSVPPPGGVE 565
Fly 566 ---------------------------------DEW------RR----PPGESYDRGARSSSREP 587
Fly 588 GVERSRSRSPLKRAR---SPG-SD-------SDTSTRR 614 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nito | NP_001286174.1 | RRM | <56..>223 | CDD:223796 | 7/28 (25%) |
| RRM1_Spen | 98..175 | CDD:240754 | |||
| RRM2_Spen | 312..390 | CDD:240755 | 16/87 (18%) | ||
| RRM3_Spen | 397..467 | CDD:240756 | 20/78 (26%) | ||
| SPOC | 630..789 | CDD:311609 | |||
| RAVER1 | NP_597709.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..41 | 10/40 (25%) | |
| Nuclear localization signal. /evidence=ECO:0000255 | 45..60 | 4/18 (22%) | |||
| RRM1_RAVER1 | 59..129 | CDD:241107 | 13/81 (16%) | ||
| RRM2_RAVER1 | 133..209 | CDD:241109 | 15/75 (20%) | ||
| RRM3_RAVER1 | 219..306 | CDD:241111 | 22/96 (23%) | ||
| Interaction with PTBP1. /evidence=ECO:0000250 | 307..395 | 9/87 (10%) | |||
| Atrophin-1 | <364..635 | CDD:331285 | 55/233 (24%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 391..474 | 20/82 (24%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165154208 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.930 | |||||