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Protein Alignment CG2915 and Cpa2

DIOPT Version :9

Sequence 1:	NP_610338.1	Gene:	CG2915 / 35754	FlyBaseID:	FBgn0033241	Length:	453	Species:	Drosophila melanogaster
Sequence 2:	NP_001013101.2	Gene:	Cpa2 / 296959	RGDID:	1305563	Length:	417	Species:	Rattus norvegicus

Alignment Length:	398	Identity:	129/398 - (32%)
Similarity:	222/398 - (55%)	Gaps:	25/398 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 NQEQIELFQKLE-EQSDSLTFIGHAREVGQKLSILVAAHRVADIADLLKTYKVKHRVLTYNFQEK 130
            ::|||....:|| |:...|.|.......|:.:.:.|....:..:...|::..:.:.::..:.|..
  Rat    32 HEEQIRTLLQLEAEEHLELDFWKSPTIPGETVHVRVPFASIQAVKVFLESQGIDYSIMIEDVQVL 96

  Fly   131 IDRNLAEV----QPESIDASQLDWQHFFHLKTIYEWLDKMVEKYPNRVTVLDMGSSTQGNAIKGV 191
            :|:...|:    |.|.  ....:::.:..|:.||:.:|.:|.:.|..|:.:::|||.:...:..:
  Rat    97 LDQEREEMLFNQQRER--GGNFNFEAYHTLEEIYQEMDNLVAENPGLVSKVNIGSSFENRPMNVL 159

  Fly   192 KLTSNANNKAIFIESGIHAREWISPAAATYIINQLLT--SQDPKVQQLAQDYNWIIFPCVNPDGY 254
            |.::..:..||::::|||||||::.|.|.:..|::.:  ..||.:..|....:..:.|..|||||
  Rat   160 KFSTGGDKPAIWLDAGIHAREWVTQATALWTANKIASDYGTDPAITSLLNTLDIFLLPVTNPDGY 224

  Fly   255 KYTFEHDRMWRKNR-QLFGT-CRGVDLNRNYPDHWNSTGSSSDPTRYDFAGPSAGSELETKRLID 317
            .::...:|||||.| :..|: |.|||.|||:..::...|:||.|....:.||...||:|.|.::|
  Rat   225 VFSQTTNRMWRKTRSKRSGSGCVGVDPNRNWDANFGGPGASSSPCSDSYHGPKPNSEVEVKSIVD 289

  Fly   318 FIRANAGKEQIKTYIALHSYSQMLMFPYGYTKERVSNYDDLQEFGKKASAAIKAENGRDYVSGSL 382
            ||::: ||  :|.:|.||||||:|||||||...:..::::|.|..:||:.|:|..:|..|..|.:
  Rat   290 FIKSH-GK--VKAFITLHSYSQLLMFPYGYKCTKPDDFNELDEVAQKAAQALKRLHGTSYKVGPI 351

  Fly   383 FETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDL----FILPAVEIQPTASEAFTAIRAIV 443
            ...||.:||||:|||: :.||..::.||||      |.    |:|||.:|.|||.|.:..::.|:
  Rat   352 CSVIYQASGGSIDWAY-DLGIKYSFAFELR------DTGFYGFLLPAKQILPTAEETWLGLKTIM 409

  Fly   444 EAAAEKGY 451
            |...:..|
  Rat   410 EHVRDHPY 417

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.