DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2915 and sdc-3

DIOPT Version :9

Sequence 1:NP_610338.1 Gene:CG2915 / 35754 FlyBaseID:FBgn0033241 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_506703.1 Gene:sdc-3 / 180009 WormBaseID:WBGene00004747 Length:2150 Species:Caenorhabditis elegans


Alignment Length:408 Identity:69/408 - (16%)
Similarity:144/408 - (35%) Gaps:120/408 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NKIINMPAARIGTQWLVILCVAMAASGTNLDS-GICPVAGDSGCRGNPPDQARYDNYRIYNVEFE 66
            :|:..|.|||:|:          .|.|.|::. ....:.||.|......::.:.|      :..|
 Worm  1158 DKLEKMIAARLGS----------IAQGANIERLSEDQLLGDQGSEDISFEEIQVD------LLLE 1206

  Fly    67 NQEQIELFQKLEEQSDSLTF----IGHAREVGQKLSILVAAHRVADIADLLKTYKVKHRVLTYNF 127
            :..::::.|.:.....|.:|    :....|..::|.  |:|...|: ..::...:|:..|:....
 Worm  1207 SGVEVQVNQSVTISRSSTSFESLLVEDPEEHPEQLP--VSASEKAN-NQIVPEVEVEGSVVPVTN 1268

  Fly   128 QEKIDRNLAEVQP-----ESIDASQLDWQHFFHLKTIYEWL-----------DKMVEKYPNRVTV 176
            |:  :.|:....|     .||.:|.       |:.|:.|.|           ..:.|:.|.:.: 
 Worm  1269 QQ--EENVTSEGPTLQEGSSIPSSS-------HIYTVDELLGTESPGPEATETPVAEESPKKKS- 1323

  Fly   177 LDMGSSTQG-------NAIKGVKLTSNANNKAIFIESGIHAREWISPAAATYIINQLLTS----- 229
               |.:|:|       |..|.::.......:|......:..:|.:.|.....::::.:.:     
 Worm  1324 ---GKTTRGRPKKVKENLKKRIQPRRGQKEEAAHEPEVVEEQEQVEPEVGPEVVHEPVPAPAAQL 1385

  Fly   230 QDPKVQQLAQDYNWIIFPCVNPDGYKYTFEHDRMWRKNRQLFGTCRGVDLNRNYPDHWNST---- 290
            :...::|..::.:.:..|.:                :...||.|........|.|...:|:    
 Worm  1386 ETEPIEQQIEEPDKVFEPII----------------EALPLFETSPVPAPEGNIPSRAHSSDDDV 1434

  Fly   291 ---GSSSDPTRYDFAGPSAGSELETKRLIDFIRANAGKEQIKT-YIALHSYSQMLMFPYGYTKER 351
               .|.:||.     ||           |:.:      ||::. .:..:.||         |:|.
 Worm  1435 QVISSETDPN-----GP-----------INLV------EQVQNDKLTAYQYS---------TEEL 1468

  Fly   352 VSNYDDLQEFGKKASAAI 369
            :..|.:|.|.|..:.:.|
 Worm  1469 LGEYGELDEAGAPSPSEI 1486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2915NP_610338.1 MpaA 50..433 CDD:225421 57/360 (16%)
Propep_M14 63..133 CDD:280416 12/73 (16%)
M14_CP_A-B_like 153..446 CDD:199844 39/248 (16%)
sdc-3NP_506703.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165670
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.