DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8728 and Uqcrc2

DIOPT Version :9

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_080175.1 Gene:Uqcrc2 / 67003 MGIID:1914253 Length:453 Species:Mus musculus


Alignment Length:447 Identity:108/447 - (24%)
Similarity:196/447 - (43%) Gaps:41/447 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 TTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNSTVNFPNKDAILKELE 161
            |.|||||.|||...|.....:||.:.:|.|||.:...|.||.| :||.:.|....:...|.:.:|
Mouse    41 TKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLL-RLASSLTTKGASSFKITRGIE 104

  Fly   162 KNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQEVSLAR------RAVNFELE 220
            ..||.....::|:.:.|........|:.:...|.:||..|.....||:..|      :||.|:  
Mouse   105 AVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKIDKAVAFQ-- 167

  Fly   221 TLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPKRMVIAGVGV 285
                  ..:..:::.:|..|:: |.|..|..||...:..|....|..:::.|.:..||.:.|:||
Mouse   168 ------NSQTRIIENLHDVAYK-NALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGV 225

  Fly   286 DHDELVSHVQRYFVEDKAIWETEALEDSGPKQVDTSIAQYTGGLVKEQCEIPIYAAAGLPELAHV 350
            .| .::..|...|:..:.     .|..:|.|      |:|.||.::||         ....|.|.
Mouse   226 SH-SVLKQVAEQFLNMRG-----GLGLAGAK------AKYRGGEIREQ---------NGDNLVHA 269

  Fly   351 ILGFEGCSHQDKDFVPLCVLNIMMGGGGSFSAGGPGKGMYSRLYTKVLNRYHWMYSATAYNHAYG 415
            .:..|..:..:.:.....||..::|.|.....|.....:.|:   .|....|..:..:|:|.:|.
Mouse   270 AIVAESAAIGNAEANAFSVLQHLLGAGPHIKRGNNTTSLLSQ---SVAKGSHQPFDVSAFNASYS 331

  Fly   416 DCGLFCVHGSAPPQHMNDMVEVLTREMMGMA-AEPGREELMRSKIQLQSMLLMNLESRPVVFEDV 479
            |.|||.::..:......:::.....::..:| ......::..:|.:|::..||::|:......::
Mouse   332 DSGLFGIYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEI 396

  Fly   480 GRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQRLLSSPPSVAARGDIHNLPEMSHI 536
            |.|.|..|....|...:::|:||..||:.:.|::.:|...|:||.|::.:.|.:..:
Mouse   397 GSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKKSMAASGNLGHTPFLDEL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 76..532 CDD:223685 107/441 (24%)
Peptidase_M16 104..253 CDD:279066 39/154 (25%)
Peptidase_M16_C 259..461 CDD:282978 40/202 (20%)
Uqcrc2NP_080175.1 PqqL 31..436 CDD:223685 103/428 (24%)
Peptidase_M16 48..194 CDD:279066 40/155 (26%)
Peptidase_M16_C 199..378 CDD:282978 40/202 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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