DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8728 and pmpcb

DIOPT Version :9

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001012514.1 Gene:pmpcb / 503532 ZFINID:ZDB-GENE-050220-10 Length:470 Species:Danio rerio


Alignment Length:500 Identity:140/500 - (28%)
Similarity:244/500 - (48%) Gaps:52/500 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QKVNTPSKEIVTHL------------PPLTEPLPNLPEAVYAAPLAESAITKVTTLPNGLRIASE 108
            |:..|..:.::.:|            |.:.:.:.|:||            ||:|||.||||:|||
Zfish     6 QRFGTAGRHLIKNLFNTKVINRSVSAPAVNQVVLNVPE------------TKLTTLDNGLRVASE 58

  Fly   109 PRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNSTVNFPNKDAILKELEKNGGICDCQSSR 173
            ......|||||.||:|.|||..:.:|.:||||.:||..|......|..| |:|..|...:..:||
Zfish    59 DSGLSTCTVGLWIDAGSRYENEHNNGTAHFLEHMAFKGTRKRSQLDLEL-EIENMGAHLNAYTSR 122

  Fly   174 DTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQEVSLARRAVNFELETLGMRPEQEPILMDMIHA 238
            :..:|.|...|:.:.....:|||:....||.:.|:...|..:..|::.  :....:.::.|.:||
Zfish   123 EQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQE--VETNLQEVVFDYLHA 185

  Fly   239 AAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPKRMVIAGV-GVDHDELVSHVQRYFVEDK 302
            .|:::..||...|.|.||:..|||..|:.|:..|:...|:|:|.. ||.|::|:...:.:|.:..
Zfish   186 TAYQETPLGRTILGPTENIKTINRGDLVEYITTHYKGPRIVLAAAGGVSHNQLIDLAKYHFGKLP 250

  Fly   303 AIWETEALEDSGPKQVDTSIAQYTGGLVKEQCEIPIYAAAGLPELAHVILGFEGCSHQDKDFVPL 367
            |.:..|||..          ..:||..::.:.:       .:| |||:.:..|.......|.:||
Zfish   251 ARYSGEALLP----------CHFTGSEIRVRDD-------KMP-LAHIAVAVEAVGWSHPDTIPL 297

  Fly   368 CVLNIMMGGGGSFSAGGPGKGMYSRLYTKVLNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMN 432
            .|.|.::|.... |.|| |..:.|:| .::..:.:..:|..::|..|.|.||:.::....|..::
Zfish   298 MVANTLIGNWDR-SLGG-GMNLSSKL-AQMSCQGNLCHSFQSFNTCYTDTGLWGLYMVCEPGTVH 359

  Fly   433 DMVEVLTREMMGMAAEPGREELMRSKIQLQSMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIK 497
            ||:.....|...:.......|:.|:|..|::.:|::|:....:.||:|||:|.. .|:.|.|.::
Zfish   360 DMIRFTQLEWKSLCTSVTESEVNRAKNLLKTNMLLHLDGSTPICEDIGRQMLCY-SRRIPLHELE 423

  Fly   498 -EIESVTAADIQRVAQR-LLSSPPSVAARGDIHNLPEMSHITNAV 540
             .|:::.|..|:.|..: :.:..|::||.|.|..|.:.:.|.|.:
Zfish   424 ARIDAINATTIKDVCLKYIYNKAPAIAAVGPIEQLLDYNSIRNGM 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 76..532 CDD:223685 134/458 (29%)
Peptidase_M16 104..253 CDD:279066 48/148 (32%)
Peptidase_M16_C 259..461 CDD:282978 50/202 (25%)
pmpcbNP_001012514.1 PqqL 33..462 CDD:223685 134/465 (29%)
Peptidase_M16 54..201 CDD:279066 48/149 (32%)
Peptidase_M16_C 206..388 CDD:282978 50/202 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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