DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8728 and UQCR-C1

DIOPT Version :9

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_650401.1 Gene:UQCR-C1 / 41800 FlyBaseID:FBgn0038271 Length:470 Species:Drosophila melanogaster


Alignment Length:479 Identity:141/479 - (29%)
Similarity:234/479 - (48%) Gaps:54/479 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LTEPLPNLPEAVYAAPLAESAITKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVS 136
            |.:.|.|:|            .|:||.|.||||:|||.......||||.||:|.|.|....:||:
  Fly    31 LQKTLLNIP------------ATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVA 83

  Fly   137 HFLEKLAFNSTVNFPNKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRP 201
            ||||.:||..|......|..| |:|..|...:..:||:..::.|...|:.:.....:|||:....
  Fly    84 HFLEHMAFKGTAKRSQTDLEL-EVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNS 147

  Fly   202 TLSDQEVSLARRAVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLM 266
            .|.:.|::..|..:..|::.  :....:.::.|.:||.|::...||...|.|.:|:..|.:..|.
  Fly   148 KLGEAEIARERSVILREMQE--VESNLQEVVFDHLHATAYQGTPLGQTILGPTKNIQSIGKADLT 210

  Fly   267 NYLKYHHSPKRMVIAGV-GVDHDELVSHVQRYFVEDKAIWETEALEDSG-PKQVDTSIAQYTGGL 329
            :|::.|:...|:|:|.. ||.||:||.         .|......||.|. |.:|  :..::||..
  Fly   211 DYIQTHYKASRIVLAAAGGVKHDDLVK---------LACSSLGGLEASVLPAEV--TPCRFTGSE 264

  Fly   330 VKEQCEIPIYAAAGLPELAHVILGFEGCSHQDKDFVPLCVLNIMMG------GGGSFSAGGPGKG 388
            |:.:.:       .|| ||||.:..|||...|:|.:||.|.|.::|      |||:.:|....:.
  Fly   265 VRVRDD-------SLP-LAHVAIAVEGCGWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLARA 321

  Fly   389 MYSRLYTKVLNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREE 453
            ....      |..|   |..::|..|.|.||:.::....|....||:..:..|.|.:.......|
  Fly   322 SAED------NLCH---SFQSFNTCYKDTGLWGIYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAE 377

  Fly   454 LMRSKIQLQSMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIKE-IESVTAADIQRVAQR-LLS 516
            :.|:|..|::.:|:.|:....:.||:|||:|.. .|:.|.|.::: |::|:..:::.||.: :..
  Fly   378 VERAKNLLKTNMLLQLDGTTPICEDIGRQILCY-NRRIPLHELEQRIDAVSVGNVRDVAMKYIYD 441

  Fly   517 SPPSVAARGDIHNLPEMSHITNAV 540
            ..|:|||.|.:.|||:.:.|.:::
  Fly   442 RCPAVAAVGPVENLPDYNRIRSSM 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 76..532 CDD:223685 138/465 (30%)
Peptidase_M16 104..253 CDD:279066 45/148 (30%)
Peptidase_M16_C 259..461 CDD:282978 58/209 (28%)
UQCR-C1NP_650401.1 PqqL 35..459 CDD:223685 139/467 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445070
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11851
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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