DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8728 and UQCR-C2

DIOPT Version :9

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_001261955.1 Gene:UQCR-C2 / 39846 FlyBaseID:FBgn0250814 Length:440 Species:Drosophila melanogaster


Alignment Length:467 Identity:110/467 - (23%)
Similarity:186/467 - (39%) Gaps:69/467 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PLAESAITKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNSTVNFP 151
            |:.:.:...|..|.|.|.:|:.........|.||:.:|.|.|.....|.||.|......||.| .
  Fly    25 PVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQN-S 88

  Fly   152 NKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQE-VSLARRAV 215
            ...||.:.:::.||.......|:.:.|..:..:...::..|.|.|: |:|.....| |..|:..|
  Fly    89 TAFAIARNIQQVGGTLTTWGDRELVGYTVTTTADNAETGLRYLQDL-LQPAFKPWELVDNAKTVV 152

  Fly   216 NFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPKRMVI 280
            | :|..:    ..|...::::|.|||| |.||.....|...|..::...|::|:....:..|..:
  Fly   153 N-QLNAV----STEERAIELVHKAAFR-NGLGNSIYSPRFQLGKLSSESLLHYVAQTFAAGRAAV 211

  Fly   281 AGVGVDHDELVSHVQRYFVEDKAIWETEALEDSGPKQVDTSIAQYTGGLVKEQC--EIPIYAAAG 343
            .|||:|::.|....|           |......|.|   .:.|.:.||..::..  ...:.|.||
  Fly   212 VGVGIDNNTLAGFAQ-----------TLQFPSGGSK---AASANWYGGDARKDTSGHRAVVAVAG 262

  Fly   344 LPELAHVILGFEGCSHQDKDFVPLCVLNIMMG---------GGGSFS-----AGGPGKGMYSRLY 394
                    .|....:|  |:.:...:|...:|         ..|.|.     |||.|.       
  Fly   263 --------QGAAASNH--KEALAFAILEQALGAKAATKRGTSAGLFGEAVNCAGGVGA------- 310

  Fly   395 TKVLNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKI 459
                       |..|.|.:|.|.|||....||..:.:...||.|.|.:  .:|....:::.|.|.
  Fly   311 -----------SVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGL--KSASVSDKDVARGKA 362

  Fly   460 QLQSMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQRLLSSPPSVAAR 524
            .|::.::....|...:.:::|||..:|.........:..|:.::.:.:|..|:::.||..:|.|.
  Fly   363 LLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALLGAIDGISQSQVQEAAKKVGSSKLAVGAI 427

  Fly   525 GDIHNLPEMSHI 536
            |.:.|:|..|.:
  Fly   428 GHLANVPYASDL 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 76..532 CDD:223685 108/461 (23%)
Peptidase_M16 104..253 CDD:279066 40/149 (27%)
Peptidase_M16_C 259..461 CDD:282978 46/217 (21%)
UQCR-C2NP_001261955.1 PqqL 22..417 CDD:223685 102/443 (23%)
Peptidase_M16 41..185 CDD:279066 41/151 (27%)
Peptidase_M16_C 190..364 CDD:282978 46/217 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11851
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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