DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8728 and uqcrc1

DIOPT Version :9

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_957114.1 Gene:uqcrc1 / 393793 ZFINID:ZDB-GENE-040426-1792 Length:474 Species:Danio rerio


Alignment Length:461 Identity:134/461 - (29%)
Similarity:219/461 - (47%) Gaps:27/461 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YAAPLAESAITKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNSTV 148
            ||..|..:..|::|||.||||||||......|||||.|..|.|:|....:|...|||.:||..|.
Zfish    32 YAQSLLGAPETRLTTLDNGLRIASEETNQPTCTVGLWIGCGSRFETEKNNGAGFFLEHMAFKGTK 96

  Fly   149 NFPNKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQEVSLARR 213
            ..| :.|:.:.:|..||..:..:||:...|.....|:.:.....|||:|....:||:.|:...|.
Zfish    97 KHP-QSALEQAVESMGGHLNAYTSREHTAYYMKTLSKDLPKAVELLAEVVQSLSLSEAEMEQQRT 160

  Fly   214 AVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPKRM 278
            ....|||.:  ....:.:.:|::||.||:...|......|..|:..:.||.|:.|:..|....||
Zfish   161 VALRELEEI--EGSLQDVCLDLLHATAFQGTALSHSVFGPSANIRTLTRNDLLEYINCHFKAPRM 223

  Fly   279 VIAGV-GVDHDELVSHVQRYFVEDKAIWETEALEDSGPKQVDTSIAQYTGGLVKEQCEIPIYAAA 342
            |:|.. ||.|||:||..:::.......:|.:|:....|       .::||..::.:.:       
Zfish   224 VLATAGGVSHDEVVSLAKQHLGGISFEYEGDAVPVLSP-------CRFTGSEIRMRDD------- 274

  Fly   343 GLPELAHVILGFEGCSHQDKDFVPLCVLNIMMGGGGSFSAGGPGKGMYSRLYTKV--LNRYHWMY 405
            .:| |||:.:..||......|.|||.|.|.:: |....:.|| ||.:.|||..:.  ||..|   
Zfish   275 AMP-LAHIAIAVEGPGAASPDIVPLMVANSII-GSYDITFGG-GKHLSSRLAQRAAELNLCH--- 333

  Fly   406 SATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKIQLQSMLLMNLE 470
            |...:..:|.|.||..::.......:.||:.......:.:.......::.|:|..|::.|:..|.
Zfish   334 SFQTFYSSYSDTGLLGIYFVTEKLKIEDMMHWAQNAWINVCTTVTESDVARAKNALRASLVGQLN 398

  Fly   471 SRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQR-LLSSPPSVAARGDIHNLPEMS 534
            ....|.:::||.:|..|:|.....:...||:||.:.::.|..: :....|:|:|.|.|..||:.:
Zfish   399 GTTPVCDEIGRHILNYGRRIPLAEWDARIEAVTPSVVRDVCSKYIYDKCPAVSAVGPIEQLPDYN 463

  Fly   535 HITNAV 540
            .:.:|:
Zfish   464 RMRSAM 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 76..532 CDD:223685 132/451 (29%)
Peptidase_M16 104..253 CDD:279066 47/148 (32%)
Peptidase_M16_C 259..461 CDD:282978 53/204 (26%)
uqcrc1NP_957114.1 PqqL 39..463 CDD:223685 130/446 (29%)
Peptidase_M16 52..199 CDD:279066 47/149 (32%)
Peptidase_M16_C 204..389 CDD:282978 53/204 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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