DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8728 and PMPCA

DIOPT Version :10

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_005266116.1 Gene:PMPCA / 23203 HGNCID:18667 Length:563 Species:Homo sapiens


Alignment Length:549 Identity:260/549 - (47%)
Similarity:355/549 - (64%) Gaps:50/549 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LMATKVTSLGGDEVGSGT-GIGQITGGV----RTSDGPQKVNTPSKEIVTHLPPLTEPLPNLPEA 82
            |.||::..      |||: |..::..|.    |.|.|....|.          ||:.|||.:|:.
Human     6 LAATRLLR------GSGSWGCSRLRFGPPAYRRFSSGGAYPNI----------PLSSPLPGVPKP 54

  Fly    83 VYAAPLAESAI-TKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVAYPSGVSHFLEKLAFNS 146
            |:|....:... ||||||.||||:||:.::|||||||::|:||.|||..|.||::||||||||:|
Human    55 VFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSS 119

  Fly   147 TVNFPNKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLADVTLRPTLSDQEVSLA 211
            |..|.:||.||..|||:|||||||:||||.:||.|.||:.:|:|..|||||.|:|.|:|:||.:.
Human   120 TARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 184

  Fly   212 RRAVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHINRNVLMNYLKYHHSPK 276
            |.||.||||.|.:||:.||:|.:|||.||:|:||:||.:.||.||:..|||.||.:||:.:::|.
Human   185 RMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPD 249

  Fly   277 RMVIAGVGVDHDELVSHVQRYFVEDKAIW-ETEALEDSGPKQVDTSIAQYTGGLVKEQCEI---- 336
            |||:|||||:|:.||...::|.:..:..| ..||::      :|.|:||||||:.|.:.::    
Human   250 RMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVD------IDRSVAQYTGGIAKLERDMSNVS 308

  Fly   337 ----PIYAAAGLPELAHVILGFEGCSHQDKDFVPLCVLNIMMGGGGSFSAGGPGKGMYSRLYTKV 397
                ||      |||.|:::|.|.||..::||:|..|||:|||||||||||||||||:||||..|
Human   309 LGPTPI------PELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNV 367

  Fly   398 LNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEPGREELMRSKIQLQ 462
            |||:||||:||:|:|:|.|.||.|:|.||.|:.:.:|||::|:|.:.|.......||.|:|.||.
Human   368 LNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLT 432

  Fly   463 SMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVT--AADIQRVAQRL----LSSPPSV 521
            |||:||||||||:|||||||||.|..||.|......|....  :..:.:.:.||    |:.|.:|
Human   433 SMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIREYRRGSEGLPQASARLRGGRLALPQAV 497

  Fly   522 AARGDIHNLPEMSHITNAVSGSGRTGLGR 550
            .....:|:...:......:|..|: |.||
Human   498 VGLWYVHHTQNLGPSPVVLSRGGQ-GQGR 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 79..521 CDD:440377 236/457 (52%)
PMPCAXP_005266116.1 PqqL 62..441 CDD:440377 210/390 (54%)

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