DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8728 and Uqcrc1

DIOPT Version :9

Sequence 1:NP_610333.1 Gene:CG8728 / 35748 FlyBaseID:FBgn0033235 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_079683.2 Gene:Uqcrc1 / 22273 MGIID:107876 Length:480 Species:Mus musculus


Alignment Length:482 Identity:140/482 - (29%)
Similarity:221/482 - (45%) Gaps:34/482 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 THLPPLTEPLPNL-PEAVYAAPLAESAITKVTTLPNGLRIASEPRYGQFCTVGLVIDSGPRYEVA 130
            |...|....||.| ..|.:|..|.....|:|:.|.||||:|||......||||:.||:|.|||..
Mouse    20 TRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETE 84

  Fly   131 YPSGVSHFLEKLAFNSTVNFPNKDAILKELEKNGGICDCQSSRDTLIYAASIDSRAIDSVTRLLA 195
            ..:|..:|||.|||..|.|.|. :|:.||:|..|...:..|:|:...|.....|:.:..|..|||
Mouse    85 KNNGAGYFLEHLAFKGTKNRPG-NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLA 148

  Fly   196 DVTLRPTLSDQEVSLARRAVNFELETLGMRPEQEPILMDMIHAAAFRDNTLGLPKLCPLENLDHI 260
            |:....:|.|.::...|..:..|::.  .....:.::.|.:||.||:...|......|.||:..:
Mouse   149 DIVQNSSLEDSQIEKERDVILREMQE--NDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRL 211

  Fly   261 NRNVLMNYLKYHHSPKRMVIAGV-GVDHDELVSHVQRYFVEDKAIWETEALEDSGPKQVDTSIAQ 324
            :|..|.:||..|:...|||:|.. ||:|.:|:...|::......::|.:|:....|       .:
Mouse   212 SRTDLTDYLNRHYKAPRMVLAAAGGVEHQQLLDLAQKHLSSVSRVYEEDAVPGLTP-------CR 269

  Fly   325 YTGGLVKEQCEIPIYAAAGLPELAHVILGFEGCSHQDKDFVPLCVLNIMMGG-----GGSFSAGG 384
            :||..::.:.:       .|| ||||.:..||....:.|.|.|.|.|.::|.     ||......
Mouse   270 FTGSEIRHRDD-------ALP-LAHVAIAVEGPGWANPDNVTLQVANAIIGHYDCTYGGGVHLSS 326

  Fly   385 PGKGMYSRLYTKVLNRYHWMYSATAYNHAYGDCGLFCVHGSAPPQHMNDMVEVLTREMMGMAAEP 449
            |...:      .|.|:.  ..|...:|.:|.|.||...|.......::|||..|..:.|.:....
Mouse   327 PLASV------AVANKL--CQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSA 383

  Fly   450 GREELMRSKIQLQSMLLMNLESRPVVFEDVGRQVLVTGQRKRPQHFIKEIESVTAADIQRVAQR- 513
            ...|:.|.|..|::.|:.:|:....|.||:||.:|..|:|.....:...|:.|.|..::.:..: 
Mouse   384 TESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKY 448

  Fly   514 LLSSPPSVAARGDIHNLPEMSHITNAV 540
            .....|:||..|.|..||:.:.|.:.:
Mouse   449 FYDQCPAVAGYGPIEQLPDYNRIRSGM 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8728NP_610333.1 PqqL 76..532 CDD:223685 136/463 (29%)
Peptidase_M16 104..253 CDD:279066 48/148 (32%)
Peptidase_M16_C 259..461 CDD:282978 53/207 (26%)
Uqcrc1NP_079683.2 PqqL 46..469 CDD:223685 131/448 (29%)
Peptidase_M16 58..205 CDD:279066 48/149 (32%)
Peptidase_M16_C 210..395 CDD:282978 53/207 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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