Sequence 1: | NP_477436.1 | Gene: | drosha / 35747 | FlyBaseID: | FBgn0026722 | Length: | 1327 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_566661.1 | Gene: | RTL2 / 821587 | AraportID: | AT3G20420 | Length: | 391 | Species: | Arabidopsis thaliana |
Alignment Length: | 330 | Identity: | 80/330 - (24%) |
---|---|---|---|
Similarity: | 117/330 - (35%) | Gaps: | 96/330 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 944 SIWKNLPEHPLQEQEPLGDRSCIDSYRVLKELTKFEDSIGI----------------KFKHIRLL 992
Fly 993 ARAFTDRSIGFTHLTLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAV 1057
Fly 1058 VCDDLGMPKYAVYANPKADLKTKD------------------------RADLLEAFLGALYVD-- 1096
Fly 1097 ----------KGLLYCEQFCHVCLFPRLQLFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPYYK 1151
Fly 1152 VVEASGPTNTRVYKVAVYFRSKRLATSSGSSIQQAEMNAAKQALENSRDLFP------------Q 1204
Fly 1205 LDHQK 1209 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
drosha | NP_477436.1 | DLL_N | 64..136 | CDD:289198 | |
Rnc | 738..>974 | CDD:223644 | 9/29 (31%) | ||
RIBOc | 826..942 | CDD:197778 | |||
rnc | 973..1196 | CDD:234633 | 64/274 (23%) | ||
RIBOc | 990..1117 | CDD:197778 | 44/162 (27%) | ||
DSRM | 1125..1196 | CDD:238007 | 14/70 (20%) | ||
RTL2 | NP_566661.1 | Rnc | 54..294 | CDD:223644 | 63/266 (24%) |
RIBOc | 75..226 | CDD:238333 | 45/164 (27%) | ||
dsrm | 232..292 | CDD:278464 | 15/71 (21%) | ||
DSRM | 313..385 | CDD:238007 | 2/3 (67%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D935825at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |