Sequence 1: | NP_477436.1 | Gene: | drosha / 35747 | FlyBaseID: | FBgn0026722 | Length: | 1327 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189798.1 | Gene: | DCL2 / 821300 | AraportID: | AT3G03300 | Length: | 1388 | Species: | Arabidopsis thaliana |
Alignment Length: | 1185 | Identity: | 231/1185 - (19%) |
---|---|---|---|
Similarity: | 384/1185 - (32%) | Gaps: | 438/1185 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 243 CSNFCEKPEDYV------------KKMNALSE-----------ADAPVESWVRSSPAELYYERTK 284
Fly 285 SEN-----EVRGRARLQK---LCTLFDEELLQRAKRVREKLPVYVPPPRKARRRVCKHKHKSEAC 341
Fly 342 SSSSSSDDDSDEDAFKIEQDCCMEELSRKV----QHPQRVHADLWHNDAGEMN---DGPLC---- 395
Fly 396 --RCSAKSRRIGIRHGIYPGETGYKLC--------------------DPNSNNAGKL-------- 430
Fly 431 -----------------FH-YRISISP--PTNF-----LTKTPTIIKHDEHEFLFEGFSLLSHVR 470
Fly 471 LSDLPVCKVIRFNIEYTIEY--------EEEKMPENFTIHELDIFFKYLFHELLELVDFNLMPNL 527
Fly 528 PSGNVEESCPAFHFFPRFVRD--------LPDNGKEVLAMV--EVLRYLLDNSAQLVERQQ---- 578
Fly 579 -----LLHL-----------NQISQSEWQNYVDFIKGM--------LVTKPGYKPCSLRVDQLDR 619
Fly 620 NNSDLPECVDRETGISHPAIVHFGICHPQLSYAGNPEYQKAWREYVKYRHLMANMSKPSFKDKRK 684
Fly 685 LEEKEQRLQEMRTQGRMKRNITVAISSEGFYRTGIMCDVVQHAMLIPVLTGHLRFHKSLDLLEES 749
Fly 750 IGYRFKNRYLLQLALTHPSYKENYGTNPDHARNSLTNCGIRQPEYGDRKIHYMNTRKRGINTLVS 814
Fly 815 IMSRFGKEHETVSNITHNERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALL 879
Fly 880 AKKLQLEEFMLYAHGSDLCHELE---------------------------------LRHAMANCF 911
Fly 912 EALMGALLLDG------------GIKVADEVFTDALFRQDEKLLSIWKNLPEHPLQEQEPLGDRS 964
Fly 965 CIDSYRVLKELTKFEDSIGIKFKHIRLLARAFTDRSIGFTHLTLGS---------NQRLEFLGDT 1020
Fly 1021 VLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANP------------ 1073
Fly 1074 ------------KADLK-TKDRADLLEAFLGALYVDKGLLYCEQFCHVCLFPRLQLFIMNQDWN- 1124
Fly 1125 DPKSKLQQCCLTLRTMDGGEPDIPYYKVVEASGPTNTRVYKVAVYFRSKRLA-TSSGSSIQQAEM 1188
Fly 1189 NAAKQA---LENSRD 1200 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
drosha | NP_477436.1 | DLL_N | 64..136 | CDD:289198 | |
Rnc | 738..>974 | CDD:223644 | 50/280 (18%) | ||
RIBOc | 826..942 | CDD:197778 | 35/160 (22%) | ||
rnc | 973..1196 | CDD:234633 | 60/261 (23%) | ||
RIBOc | 990..1117 | CDD:197778 | 46/160 (29%) | ||
DSRM | 1125..1196 | CDD:238007 | 13/74 (18%) | ||
DCL2 | NP_001189798.1 | DEXDc | 38..192 | CDD:238005 | |
Helicase_C | 382..489 | CDD:278689 | 15/77 (19%) | ||
Dicer_dimer | 560..637 | CDD:281376 | 10/76 (13%) | ||
PAZ_CAF_like | 807..937 | CDD:239210 | 32/187 (17%) | ||
RIBOc | 980..1123 | CDD:238333 | 30/153 (20%) | ||
Rnc | 1151..1384 | CDD:223644 | 62/270 (23%) | ||
RIBOc | 1164..1318 | CDD:238333 | 43/155 (28%) | ||
DSRM | 1323..1383 | CDD:214634 | 13/73 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |