Sequence 1: | NP_477436.1 | Gene: | drosha / 35747 | FlyBaseID: | FBgn0026722 | Length: | 1327 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
Alignment Length: | 1218 | Identity: | 232/1218 - (19%) |
---|---|---|---|
Similarity: | 383/1218 - (31%) | Gaps: | 460/1218 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 RNQVSD-DYS-PRGHHERERNETLEKTR-AKPKVETERDRLLRQWCSNFCEKPEDYVKKMNALSE 262
Fly 263 ADAPVESWVRSSPAELYYERTKSENEVRGRARLQKLCTLFDEELLQRAKRVREKLPVYVPPPRKA 327
Fly 328 RRRVCKHKHKSEACSSSSSSDDDSDEDAFKIEQDCCMEELSRKV----QHPQRVHADLWHNDAGE 388
Fly 389 MN-DGPLCRCSAKSRRIGIRHGIYPGETGYKLCDPNS---------NNAGKLFHYRISISPPTN- 442
Fly 443 -----------FLTK--TPTIIKHDEHEFLFEGFSLLSHVRLSDLPVCKVIRFNIEYTIEYEEEK 494
Fly 495 MPENFTIHELDIFFKYLFHELLELVDFNLMPNLPSGNVEESCPAFHFFPRFVRDLPDNGKEVLAM 559
Fly 560 VEVLRYLLDNSAQLVERQQLLHLNQISQSEWQ----NYVDFIKGMLVTKPGYKPCSLRVDQLDRN 620
Fly 621 N---SDLPECVDRETGISHPAIVHFGICHPQLSYAGNPEYQKAWREYVKYRHLMANMSKPSFKDK 682
Fly 683 RK--LEEKEQRLQEMRTQ---GRMKRNITVAISSEGFYRTGIMCDVVQHAMLIPVLTGHLRFHKS 742
Fly 743 LDLLEESIGYRFKNRYLLQLALTHPSYKENYGTNPDHARNSLTNCGIRQPEYGDRKIHYMNTRKR 807
Fly 808 GINTLVSIMSRFGKEHETVSNITHNERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQ 872
Fly 873 NQHLALLAKKLQLEEFMLYA--------------------------------------------- 892
Fly 893 -----------------------------HGSDLCHE--------LELRH-----AMANCFEALM 915
Fly 916 GALL-------------------------LDGGIKV----------ADEVFTDALFRQDEKLLSI 945
Fly 946 WKNLPEHPLQEQEPLGDRSCIDSYRVLKELTKFEDSIGIKFKHIRLLARAFTDRSIGFTHLTLGS 1010
Fly 1011 NQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANP-- 1073
Fly 1074 --------------------------------KADLKT-KDRADLLEAFLGALYVDKGLLYCEQF 1105
Fly 1106 CHV---CLFPRLQLFIMNQDWNDPKSKLQQCC-LTLRTMDGGEPDIPYYKVVEASGPTNTRVYKV 1166
Fly 1167 AVYFRSKRLATSSGSSIQQAEMNAAKQALENSRDLFPQLDHQKRVIAK 1214 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
drosha | NP_477436.1 | DLL_N | 64..136 | CDD:289198 | |
Rnc | 738..>974 | CDD:223644 | 57/357 (16%) | ||
RIBOc | 826..942 | CDD:197778 | 37/237 (16%) | ||
rnc | 973..1196 | CDD:234633 | 67/261 (26%) | ||
RIBOc | 990..1117 | CDD:197778 | 42/164 (26%) | ||
DSRM | 1125..1196 | CDD:238007 | 18/71 (25%) | ||
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | |
Dicer_PBD | 240..344 | CDD:277191 | |||
DEAD-like_helicase_C | 490..614 | CDD:365791 | |||
Dicer_dimer | 825..916 | CDD:397444 | |||
PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
RIBOc | 1724..1930 | CDD:238333 | 36/242 (15%) | ||
RIBOc | 2008..2172 | CDD:238333 | 42/165 (25%) | ||
DSRM_DICER | 2177..2240 | CDD:380680 | 19/79 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |