Sequence 1: | NP_477436.1 | Gene: | drosha / 35747 | FlyBaseID: | FBgn0026722 | Length: | 1327 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_683750.2 | Gene: | Dicer1 / 192119 | MGIID: | 2177178 | Length: | 1906 | Species: | Mus musculus |
Alignment Length: | 1676 | Identity: | 301/1676 - (17%) |
---|---|---|---|
Similarity: | 484/1676 - (28%) | Gaps: | 752/1676 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 131 PSERQRYTS----NSSSQGYHHYPGYSSGRRYEQRHDQEHRQIQDS------------------- 172
Fly 173 ----RYA-------------HEPRHGHYAHRQAKGSQHGYYGSAARNQVSDDYSPRGHHE----R 216
Fly 217 ERNETLEKTRAKPKVETERDRLLRQWCSNFCEKPEDYVKKMNALSEADAPVE--SWVRSSPAELY 279
Fly 280 YERTKSENEVRGRAR--LQKLCTLFDEELLQRAKRVREKLPVYVPPPRKARRRVCKHKHKSEACS 342
Fly 343 SSSSSDDD------SDEDAF------------KIEQDCCMEELSRKVQHPQRVHADLWHNDAGEM 389
Fly 390 NDGPLCRCSAKSRRIGIRHGIYPGETGYK-------------------------------LCDPN 423
Fly 424 SNNAGKLFHYRISISPPTNFLTKTPTIIKHDEHEFLFEG-------------------------- 462
Fly 463 -------------------------------------FSLLSHVRLSDLPVCKVIRFNIEYTIEY 490
Fly 491 EEEKMPENFTIHE--LDI---FFKYLFHELLEL-------------------------------V 519
Fly 520 DFNLMPN---------LPSGNVEESCPAFHF----------FPR----------FVRDL------ 549
Fly 550 ----PDNGKEVLAMVEVLRYLLD----NSAQL-----VERQQLL---HLNQISQSEWQNYVDFIK 598
Fly 599 GMLVTKPGYKPCSLRVDQLDRNNSDLPE-CVDRETGISHP---AIVHFGICHPQLSY-------A 652
Fly 653 GNPEYQKAWREYVKYRHLMANMSKPS--FKDKRKLEEK------EQRLQEMRTQGRMKRNITVAI 709
Fly 710 SSEGFYRTGIMCDVVQHA----MLIPVLTGH-------------------------------LRF 739
Fly 740 HKSL-----DLLE------ESIGYRFKNRYLLQLALTHPSYK-ENYGTNPDHARNSLTNCGIRQP 792
Fly 793 EYGDRKIH--------YMNTRKRGINTLVSIMSRFGKEHE---------------------TVSN 828
Fly 829 ITHN---ERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALLAKK-------- 882
Fly 883 ----------------------------------------------------------------- 882
Fly 883 ----------LQLEEFMLYAHG-------------SDLCHELEL--------------------- 903
Fly 904 ---------------------------------------------------RHAMANCFEALMGA 917
Fly 918 LLLDGGIKVADEVFTDALFRQDEKLLSIWKNLPEH----PLQEQ-------------EPLGDRS- 964
Fly 965 --------CI-----------DSYRVLKELTK----FEDSIGIKFKHIRLLARAFTDRSIGFTHL 1006
Fly 1007 TLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYA 1071
Fly 1072 NPK----------------------ADLK--------------TKDRADLLEAFLGALYVDKGL- 1099
Fly 1100 ------LYCEQFCHVCLFPRLQLFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPYYKVVEASGP 1158
Fly 1159 TNTRVY----KVAVYFRSKRLATSSGSSIQQAEMNAAKQALENSRDLFPQL 1205 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
drosha | NP_477436.1 | DLL_N | 64..136 | CDD:289198 | 3/4 (75%) |
Rnc | 738..>974 | CDD:223644 | 73/484 (15%) | ||
RIBOc | 826..942 | CDD:197778 | 40/286 (14%) | ||
rnc | 973..1196 | CDD:234633 | 69/273 (25%) | ||
RIBOc | 990..1117 | CDD:197778 | 43/169 (25%) | ||
DSRM | 1125..1196 | CDD:238007 | 18/74 (24%) | ||
Dicer1 | NP_683750.2 | DEXHc_dicer | 32..229 | CDD:350792 | |
Dicer_PBD | 261..355 | CDD:277191 | |||
SF2_C_dicer | 362..554 | CDD:350189 | 43/218 (20%) | ||
Dicer_dimer | 620..708 | CDD:367465 | 14/107 (13%) | ||
PAZ_dicer_like | 876..998 | CDD:239209 | 27/135 (20%) | ||
RIBOc | 1286..>1377 | CDD:197778 | 23/90 (26%) | ||
Rnc | 1650..1902 | CDD:223644 | 69/275 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |