DRSC/TRiP Functional Genomics Resources

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Protein Alignment drosha and mRpL44

DIOPT Version :10

Sequence 1:NP_477436.1 Gene:drosha / 35747 FlyBaseID:FBgn0026722 Length:1327 Species:Drosophila melanogaster
Sequence 2:XP_321167.5 Gene:mRpL44 / 1281227 VectorBaseID:AGAMI1_006950 Length:329 Species:Anopheles gambiae


Alignment Length:331 Identity:73/331 - (22%)
Similarity:114/331 - (34%) Gaps:85/331 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   932 TDALFRQDEKLLSIWKNLPEH-----PLQE----QEPLG-----DRSCIDSYRVLKELTKFEDSI 982
            |.:|.|..:: ..|.:|...|     .|:|    :|.:|     .||....:....|:..|...:
Mosquito     7 TRSLLRGAQR-FDIHRNRDVHRWVAPTLRELRRRREKMGPEAALPRSSHSDWNYSAEIFAFGKRL 70

  Fly   983 GIKFKHIRLLARAFTDRS-----------IGFTHLTLG--SNQRLEFLGDTVLQLICSEYLYRHF 1034
            ...| ...:|.:|||.:|           :|.....||  .|:.|...|:.::......:|....
Mosquito    71 QESF-DANVLQQAFTHQSFIEQETRKQAAVGIEQPVLGVHDNRELIAQGEQLVAEYVEAFLLTAL 134

  Fly  1035 PEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANPKADLKTKD-------------RADLL 1086
            |......::.:|.:|.:.               |..|:..|.|.|||             .|..|
Mosquito   135 PRLPRQFIASVREALTSE---------------AQLAHVSAHLGTKDIIMAAEFPIDDALLASTL 184

  Fly  1087 EAFLGALYVDKG----LLYCEQFCHVC-------LFPRLQLFIMNQDWNDPKSKLQQCCLTLRTM 1140
            :|.:.||....|    .|:...|  :|       |:..|::       .||...||:.|.. |.:
Mosquito   185 KAIVAALQRSSGDERCFLFVRDF--LCGQLNQRDLYEYLEI-------ADPLRTLQEYCKE-RGL 239

  Fly  1141 DGGEPDIPYYKVVEASGPTNTRVYKVAVYFRSKRLATSSGSSIQQAEMNAAKQALENSRDLFPQL 1205
            ...||.:    :......|....::|.:|...|.|.|..|.:...|...||:..|   |.||...
Mosquito   240 ADPEPRL----IGNVGRNTLLAAHQVGIYSDRKLLGTGYGENQTVAVEEAARDCL---RQLFGTE 297

  Fly  1206 DHQKRV 1211
            .|.|.|
Mosquito   298 LHMKPV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
droshaNP_477436.1 RIBOc 826..942 CDD:197778 3/9 (33%)
Rnc 973..1196 CDD:440336 54/259 (21%)
mRpL44XP_321167.5 None

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