Sequence 1: | NP_477436.1 | Gene: | drosha / 35747 | FlyBaseID: | FBgn0026722 | Length: | 1327 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001107152.1 | Gene: | drosha / 100135003 | XenbaseID: | XB-GENE-494685 | Length: | 1325 | Species: | Xenopus tropicalis |
Alignment Length: | 1295 | Identity: | 619/1295 - (47%) |
---|---|---|---|
Similarity: | 814/1295 - (62%) | Gaps: | 132/1295 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 PPLPP-----------------------PPVQPAPP-PPPPPPEEDLSPPGVGVPSHNYSSNESH 44
Fly 45 SQSSKSLDYVYP----ETPAPYASSVPSYDPYQQ--PPAYGYEGYAYNEQAQKYGGQESHYQYQY 103
Fly 104 PASGSSFLYE-----SYKYPDRYPAYSSNYR----PPSERQRYTSNSSSQGYHHYPGYSSGRRYE 159
Fly 160 QRHDQEHRQIQDSRYAHEPRHGHYAHRQAKGSQHGYYGSAARNQVSDDYSPRGHHERER----NE 220
Fly 221 TL-EKTRAKPKVE---TERDRLLRQWCSNFCEKPEDYVKKMNALSEADAPVESWVRSSPAELYYE 281
Fly 282 RTK----SENEVRGRARLQKLCTLFDEELLQRAKRVREKLPVYVPPPRKARRRVCKHKHKSEACS 342
Fly 343 SSSSSDDDSDEDAFKIEQDCCMEELSRKVQHPQRVHADLWHNDAGEMNDGPLCRCSAKSRRIGIR 407
Fly 408 HGIYPGETGYKLCDPNSNNAGKLFHYRISISPPTNFLTKTPTIIKHDEHEFLFEGFSLLSHVRLS 472
Fly 473 DLPVCKVIRFNIEYTIEYEEEKMPENFTIHELDIFFKYLFHELLELVDFNLMPNLPS-GNVEESC 536
Fly 537 PAFHFFPRFVRDLPDNGKEVLAMVEVLRYLLDNSAQLVERQQLLHLNQISQSEWQNYVDFIKGML 601
Fly 602 VTKPGYKPCSLRVDQLDRN--NSDLPECVDRETGISHPAIVHFGICHPQLSYAGNPEYQKAWREY 664
Fly 665 VKYRHLMANMSKPSFKDKRKLEEKEQRLQEMRTQGRMKRNITVAISSEGFYRTGIMCDVVQHAML 729
Fly 730 IPVLTGHLRFHKSLDLLEESIGYRFKNRYLLQLALTHPSYKENYGTNPDHARNSLTNCGIRQPEY 794
Fly 795 GDRKIHYMNTRKRGINTLVSIMSRFGKEHETVSNITHNERLEFLGDAVVEFLSSIHLFFMFPELE 859
Fly 860 EGGLATYRAAIVQNQHLALLAKKLQLEEFMLYAHGSDLCHELELRHAMANCFEALMGALLLDGGI 924
Fly 925 KVADEVFTDALF-RQDEKLLSIWKNLPEHPLQEQEPLGDRSCIDSYRVLKELTKFEDSIGIKFKH 988
Fly 989 IRLLARAFTDRSIGFTHLTLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNR 1053
Fly 1054 TQAVVCDDLGMPKYAVYANPKAD----LKTKDRADLLEAFLGALYVDKGLLYCEQFCHVCLFPRL 1114
Fly 1115 QLFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPYYKVVEASGPTNTRVYKVAVYFRSKRLATSS 1179
Fly 1180 GSSIQQAEMNAAKQALENSRDLFPQLDHQKRVIAKSIKKQTGNELDNDSDRQHQEEKIKR 1239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
drosha | NP_477436.1 | DLL_N | 64..136 | CDD:289198 | 21/82 (26%) |
Rnc | 738..>974 | CDD:223644 | 156/236 (66%) | ||
RIBOc | 826..942 | CDD:197778 | 83/116 (72%) | ||
rnc | 973..1196 | CDD:234633 | 140/226 (62%) | ||
RIBOc | 990..1117 | CDD:197778 | 80/130 (62%) | ||
DSRM | 1125..1196 | CDD:238007 | 43/70 (61%) | ||
drosha | NP_001107152.1 | Extensin_2 | 45..96 | CDD:252669 | |
RIBOc | 914..1024 | CDD:238333 | 82/109 (75%) | ||
rnc | 1060..1288 | CDD:234633 | 140/231 (61%) | ||
RIBOc | 1077..1209 | CDD:238333 | 81/135 (60%) | ||
DSRM | 1216..1287 | CDD:214634 | 44/70 (63%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 607 | 1.000 | Domainoid score | I192 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H8293 | |
Inparanoid | 1 | 1.050 | 1102 | 1.000 | Inparanoid score | I238 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D58671at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003184 | |
OrthoInspector | 1 | 1.000 | - | - | oto102345 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11207 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4740 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.160 |