Protein Alignment rnh1 and AT1G24090

DIOPT Version :9

• Sequence 1: NP_477315.1
• Gene: rnh1 / 35746
• FlyBaseID: FBgn0023171
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: NP_001319072.1
• Gene: AT1G24090 / 839020
• AraportID: AT1G24090
• Length: 353
• Species: Arabidopsis thaliana
• Alignment Length: 333
• Identity: 66/333 - (19%)
• Similarity: 120/333 - (36%)
• Gaps: 98/333 - (29%)

  Fly    17 AFYAVASGRRSGVYGSWAECEEQVKG----FKNAKYKKFKTRQEADQFVN--GCKSYAPQDVAVP 75
            ||:.|..|...|:|...::|:.||..    ...:.||.:...::.:::::  |.|.        |
plant    83 AFFVVRKGDVIGIYKDLSDCQAQVGSSVFDLPVSVYKGYSLPKDTEEYLSSVGLKK--------P 139

  Fly    76 LGKEKASLASWKNSIEVNKNPKYTDEWPEEDHDLAEDDLNAAMNEVEGDPKPSNSSNLPDILNRK 140
            |...:||                         ||.:|...|....:..:|.|.......|....:
plant   140 LYSLRAS-------------------------DLKDDMFGALTPCLFQEPAPCTVKVSEDETTSE 179

  Fly   141 RKGTTSGDKRNKIPRHASQVSEATGLKQVGAFQFEIDAEGYV-----IVYTDGSCIGN-GRAGAC 199
            .|  :..||::::|..:........|.:|       :...|:     .:..||:..|| |.:||.
plant   180 TK--SKDDKKDQLPSASISYDPLEKLSKV-------EPSAYISDETCFIEFDGASKGNPGLSGAA 235

  Fly   200 A---------------GYGVYFGKNHQLNAAKPVEGRVTNNVGEIQAAIHAIKTALDLGIQKLCI 249
            |               |.|:                 .|||..|..|.|..:|.|::.|.:.:.:
plant   236 AVLKTEDGSLICRVRQGLGI-----------------ATNNAAEYHALILGLKYAIEKGYKNIKV 283

  Fly   250 STDSQFLINSITLWVAGWKKRDWKLKNNQPVKNVVDFKELDKLLQENNITVKWNYVEAHKGIEGN 314
            ..||:.:...|        |..||: |::.:..:  .||. |||....::.:.::|..:...:.:
plant   284 KGDSKLVCMQI--------KGQWKV-NHEVLAKL--HKEA-KLLCNKCVSFEISHVLRNLNADAD 336

  Fly   315 EMADKLAR 322
            |.|:...|
plant   337 EQANLAVR 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnh1	NP_477315.1	Cauli_VI	19..60	CDD:279957	9/44 (20%)
		RNase_HI_eukaryote_like	183..326	CDD:260012	35/156 (22%)
AT1G24090	NP_001319072.1	Cauli_VI	84..>106	CDD:396314	6/21 (29%)
		RNase_HI_like	217..344	CDD:260011	34/155 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0328
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1434144at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910