Sequence 1: | NP_477315.1 | Gene: | rnh1 / 35746 | FlyBaseID: | FBgn0023171 | Length: | 333 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013115.1 | Gene: | Rnaseh1 / 298933 | RGDID: | 1309012 | Length: | 285 | Species: | Rattus norvegicus |
Alignment Length: | 316 | Identity: | 116/316 - (36%) |
---|---|---|---|
Similarity: | 151/316 - (47%) | Gaps: | 58/316 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 FYAVASGRRSGVYGSWAECEEQVKGFKNAKYKKFKTRQEADQFVNGCKSYAPQDVAVPLGKEKAS 82
Fly 83 LASWKNSIEVNKNPKYTDEWPEEDHDLAEDDLNAAMNEVEGDPKPSNSSNLPDILNRKRKGTTSG 147
Fly 148 DKRNKIPRHASQVSEATGLKQVGAFQFEIDAEGYVIVYTDGSCIGNGRAGACAGYGVYFGKNHQL 212
Fly 213 NAAKPVEGRVTNNVGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKLKNN 277
Fly 278 QPVKNVVDFKELDKLLQENNITVKWNYVEAHKGIEGNEMADKLARQGSALYKQKNG 333 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rnh1 | NP_477315.1 | Cauli_VI | 19..60 | CDD:279957 | 22/40 (55%) |
RNase_HI_eukaryote_like | 183..326 | CDD:260012 | 69/142 (49%) | ||
Rnaseh1 | NP_001013115.1 | Cauli_VI | 29..70 | CDD:279957 | 22/40 (55%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 72..122 | 14/99 (14%) | |||
RNase_HI_eukaryote_like | 140..281 | CDD:260012 | 69/145 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353208 | |
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4861 |
eggNOG | 1 | 0.900 | - | - | E1_COG0328 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2202 | |
Inparanoid | 1 | 1.050 | 173 | 1.000 | Inparanoid score | I4002 |
OMA | 1 | 1.010 | - | - | QHG63618 | |
OrthoDB | 1 | 1.010 | - | - | D1434144at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003232 | |
OrthoInspector | 1 | 1.000 | - | - | oto96422 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101549 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10642 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3158 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |