Protein Alignment rnh1 and Rnaseh1

DIOPT Version :10

• Sequence 1: NP_477315.1
• Gene: rnh1 / 35746
• FlyBaseID: FBgn0023171
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: NP_035405.2
• Gene: Rnaseh1 / 19819
• MGIID: 1335073
• Length: 285
• Species: Mus musculus
• Alignment Length: 309
• Identity: 113/309 - (36%)
• Similarity: 148/309 - (47%)
• Gaps: 57/309 - (18%)

  Fly    18 FYAVASGRRSGVYGSWAECEEQVKGFKNAKYKKFKTRQEADQFVNGCKSYAPQDVAVPLG-KEKA 81
            ||||..|||:||:.||:||:.||..|..|::|||.|..||..||....|        |.| |.:.
Mouse    28 FYAVRRGRRTGVFLSWSECKAQVDRFPAARFKKFATEDEAWAFVRSSSS--------PDGSKGQE 84

  Fly    82 SLASWKNSIEVNKNPKYTDEWPEEDHDLAEDDLNAAMNEVEGDPKPSNSSNLPDILNRKRKGTTS 146
            |....|:..:.:|.|:                  ..:.|.|..|:|.
Mouse    85 SAHEQKSQAKTSKRPR------------------EPLGEGEELPEPG------------------ 113

  Fly   147 GDKRNKIPRHASQVSEATGLKQVGAFQFEIDAEGYVIVYTDGSCIGNGRAGACAGYGVYFGKNHQ 211
                   |:|..|.:|.:.:....||.:..::   |:|||||.|..|||..|.||.|||:|..|.
Mouse   114 -------PKHTRQDTEPSAVVSKDAFSYMGES---VVVYTDGCCSSNGRKRARAGIGVYWGPGHP 168

  Fly   212 LNAAKPVEGRVTNNVGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKLKN 276
            ||....:.||.||...||.||..||..|....|.||.:.|||.|.||.||.||.||||..|:...
Mouse   169 LNVGIRLPGRQTNQRAEIHAACKAIMQAKAQNISKLVLYTDSMFTINGITNWVQGWKKNGWRTST 233

  Fly   277 NQPVKNVVDFKELDKLLQENNITVKWNYVEAHKGIEGNEMADKLARQGS 325
            .:.|.|..||.|||:|.|  .:.::|.::..|.|..|||.||:|||:|:
Mouse   234 GKDVINKEDFMELDELTQ--GMDIQWMHIPGHSGFVGNEEADRLAREGA 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnh1	NP_477315.1	Cauli_VI	18..60	CDD:460297	23/41 (56%)
		RNase_HI_eukaryote_like	183..326	CDD:260012	69/143 (48%)
Rnaseh1	NP_035405.2	Cauli_VI	28..70	CDD:460297	23/41 (56%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	72..126		16/104 (15%)
		RNase_HI_eukaryote_like	140..281	CDD:260012	69/143 (48%)