powered by:
Protein Alignment rnh1 and rnh-1.3
DIOPT Version :9
Sequence 1: | NP_477315.1 |
Gene: | rnh1 / 35746 |
FlyBaseID: | FBgn0023171 |
Length: | 333 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_492581.1 |
Gene: | rnh-1.3 / 182229 |
WormBaseID: | WBGene00007303 |
Length: | 139 |
Species: | Caenorhabditis elegans |
Alignment Length: | 128 |
Identity: | 44/128 - (34%) |
Similarity: | 69/128 - (53%) |
Gaps: | 4/128 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 185 YTDGSCIGNGRAGACAGYGVYFGKNHQLNAAKPV-EGRVTNNVGEIQAAIHAIKTALDLGIQKLC 248
|||||.:|||:.|:..||||:...:...|.:... .|..|||..|::|..||.:.|.|:....:.
Worm 6 YTDGSALGNGQQGSRGGYGVHVPSDTSKNVSGSYPHGPQTNNRYELEAIKHATQMARDVPDSHVR 70
Fly 249 ISTDSQFLINSITLWVAGWKKRDWKLKNNQPVKNVVDFKELDK---LLQENNITVKWNYVEAH 308
|.|||:...:|:|.|...||...:|..:.|.|||....:::|: .|:.:..||::.:|..|
Worm 71 IHTDSKNAKDSVTKWNDNWKSNGYKTSSGQDVKNQDLIRDIDRNVQALKHSGKTVEFEHVRGH 133
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0328 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S2771 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1434144at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003232 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101549 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10642 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1165 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
9 | 8.800 |
|
Return to query results.
Submit another query.