Protein Alignment rnh1 and rnh1

DIOPT Version :10

• Sequence 1: NP_477315.1
• Gene: rnh1 / 35746
• FlyBaseID: FBgn0023171
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: XP_317369.5
• Gene: rnh1 / 1277863
• VectorBaseID: AGAMI1_000294
• Length: 294
• Species: Anopheles gambiae
• Alignment Length: 315
• Identity: 131/315 - (41%)
• Similarity: 178/315 - (56%)
• Gaps: 43/315 - (13%)

  Fly    16 MAFYAVASGRRSGVYGSWAECEEQVKGFKNAKYKKFKTRQEADQFV-NGCKSYAPQDVAVPLGKE 79
            |.|||||.||:.|::.:|.||:.||.||..|::|||.|..||:.|: |..........:|..||:
Mosquito    16 MPFYAVAKGRQVGIFSTWPECQAQVTGFTGARFKKFPTEAEANAFIDNNRDGGGGGGGSVLTGKK 80

  Fly    80 KASLASWKNSIEVNKNPKYTDEWPEEDHDLAEDDLNAAMNEVEGDPKPSNSSNLPDILNRKRKGT 144
            .::.:||...                        .:|:.:...|...|:|......||
Mosquito    81 PSTASSWSGK------------------------RSASTSSTGGALPPANKQAKKTIL------- 114

  Fly   145 TSGDKRNKIPRHASQVSEATGLKQVGAFQFEIDAEGYVIVYTDGSCIGNGRAGACAGYGVYFGKN 209
                 .:|.|...::      :.:.|.:.|..|.:|:|.|||||||.|||.|.|.||.||||.:.
Mosquito   115 -----LDKAPTAVAK------MVKYGEYSFLQDEDGFVHVYTDGSCEGNGTARAVAGLGVYFAEG 168

  Fly   210 HQLNAAKPVEGRVTNNVGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKL 274
            |.||.||||.||.|||.||||||..||:.|...||::|.::||||||||:||.|:.|||:|:|.|
Mosquito   169 HALNTAKPVSGRATNNCGEIQAASLAIRLARQQGIRRLVVNTDSQFLINAITKWLPGWKRRNWTL 233

  Fly   275 KNNQPVKNVVDFKELDKLLQENNITVKWNYVEAHKGIEGNEMADKLARQGSALYK 329
            .:..||||..||.||::.|...:|.:|||:|:||.||.|||.||:|||:||.:|:
Mosquito   234 ASGGPVKNQTDFMELERELSAGDIQIKWNHVDAHCGILGNERADQLARKGSEMYR 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnh1	NP_477315.1	Cauli_VI	18..60	CDD:460297	22/41 (54%)
		RNase_HI_eukaryote_like	183..326	CDD:260012	86/142 (61%)
rnh1	XP_317369.5	None