Protein Alignment rnh1 and LOC100493932

DIOPT Version :9

• Sequence 1: NP_477315.1
• Gene: rnh1 / 35746
• FlyBaseID: FBgn0023171
• Length: 333
• Species: Drosophila melanogaster
• Sequence 2: XP_002935076.2
• Gene: LOC100493932 / 100493932
• -ID: -
• Length: 204
• Species: Xenopus tropicalis
• Alignment Length: 307
• Identity: 91/307 - (29%)
• Similarity: 122/307 - (39%)
• Gaps: 107/307 - (34%)

  Fly    19 YAVASGRRSGVYGSWAECEEQVKGFKNAKYKKFKTRQEADQFVNGCKSYAPQDVAVPLGKEKASL 83
            |||..||:.|||.:|.||.|||..:..|.::|..|.:||..|....:.|:|...|   |:
 Frog     3 YAVRRGRQVGVYDTWEECREQVDRYPYASFRKLPTYREARNFARSNERYSPYSSA---GR----- 59

  Fly    84 ASWKNSIEVNKNPKYTDEWPEEDHDLAEDDLNAAMNEVEGDPKPSNSSNLPDILNRKRKGTTSGD 148
                                                                             
 Frog    60 ----------------------------------------------------------------- 59

  Fly   149 KRNKIPRHASQVSEATGLKQVGAFQFEIDAEGYVIVYTDGSCIGNGRAGACAGYGVYFGKNHQLN 213
                                        .||    |||||.|..||:.||..|.|||:|.....|
 Frog    60 ----------------------------SAE----VYTDGCCYRNGQYGANGGIGVYWGPEDSRN 92

  Fly   214 AAKPVEGRVTNNVGEIQAAIHAIKTALDLGIQKLCISTDSQFLINSITLWVAGWKKRDWKLKNNQ 278
            .:..::||.||...||:||..|::.|.|..|..|.|:|||:|.|..:|.||..||:..||..:.:
 Frog    93 VSAKLKGRQTNQRAEIEAACTAVEQARDDNITSLNINTDSRFTIKGMTQWVPRWKENGWKTIDGR 157

  Fly   279 PVKNVVDFKELDKLLQENNITVKWNYVEAHKGIEGNEMADKLARQGS 325
            .|.|..||::|||..:  |:.:|||||..|.|..||:.||:||:.||
 Frog   158 DVINKQDFQKLDKACE--NMDIKWNYVPGHSGSVGNDRADQLAKAGS 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnh1	NP_477315.1	Cauli_VI	19..60	CDD:279957	19/40 (48%)
		RNase_HI_eukaryote_like	183..326	CDD:260012	65/143 (45%)
LOC100493932	XP_002935076.2	Cauli_VI	3..44	CDD:396314	19/40 (48%)
		RNase_HI_eukaryote_like	63..203	CDD:260012	65/142 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1434144at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1165
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.040