DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS12 and tsgA

DIOPT Version :10

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_417823.1 Gene:tsgA / 947869 ECOCYCID:EG11262 Length:393 Species:Escherichia coli


Alignment Length:457 Identity:83/457 - (18%)
Similarity:152/457 - (33%) Gaps:177/457 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AVLLFVGMMI----NYFQRVNISAAIVPMTQSTAGAPFYTWDTSDKSLILSSFFWGYVVSQVPAG 82
            |:::..||::    :|| .:.:|:.....|...||            :::|.|...:::..||. 
E. coli    22 ALVIVTGMVMGNIADYF-NLPVSSMSNTFTFLNAG------------ILISIFLNAWLMEIVPL- 72

  Fly    83 LLAKRFGAKLVLGLATAIGGILCFFHPIAAKSGWQSICVLRVLTGLVQ--GTVYPCVHTLLAKWV 145
            ....|||..|   :..|:.|:: |.|.:|..|.  ::.:|.|::|:..  ||             
E. coli    73 KTQLRFGFLL---MVLAVAGLM-FSHSLALFSA--AMFILGVVSGITMSIGT------------- 118

  Fly   146 PRTERGLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALLFFWQAANEPVT 210
                  .|.|.:|.|.|.|:. :|.|..|...:.|    :|.:.....||.::.::|..|     
E. coli   119 ------FLVTQMYEGRQRGSR-LLFTDSFFSMAGM----IFPMIAAFLLARSIEWYWVYA----- 167

  Fly   211 ASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYGLLAAHCGF----------------- 258
                                   .:.:.:::||       :|...|.|                 
E. coli   168 -----------------------CIGLVYVAIF-------ILTFGCEFPALGKHAPKTDAPVEKE 202

  Fly   259 TWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLCFVVSPISDLLINRGTISITTARKL 323
            .||...|...:.....::.||     .|:|.:|.:|.||                .:|:..|..|
E. coli   203 KWGIGVLFLSVAALCYILGQL-----GFISWVPEYAKGL----------------GMSLNDAGTL 246

  Fly   324 FNS------IGQWG------------PMACLIGLGYM--------TADEKTWAILLL-------- 354
            .::      :|.|.            .:..|.||..:        |.....|:||.|        
E. coli   247 VSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIY 311

  Fly   355 --TLAVG-----------INAGCSC---GYLINHIDLSP--NFAGPMMGV--TNGIAGVTSIIAP 399
              .:.:|           :|...:|   |.::..:...|  ..:||...:  .||:..|..::..
E. coli   312 TTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCF 376

  Fly   400 LV 401
            |:
E. coli   377 LL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS_SLC17 22..437 CDD:340876 83/457 (18%)
tsgANP_417823.1 PRK03699 2..393 CDD:235151 83/457 (18%)

Return to query results.
Submit another query.