DRSC/TRiP Functional Genomics Resources

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Protein Alignment MFS12 and cima-1

DIOPT Version :9

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:458 Identity:109/458 - (23%)
Similarity:202/458 - (44%) Gaps:36/458 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NISAAIVPMTQSTAGAPFY------TWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGL 96
            |::.|::.||    ..|.:      .|.:..:.|:|::...|.:: .:..|:.|.|...|.::  
 Worm    87 NLAVALICMT----SCPVHGYGGTLEWQSQQEGLVLAAQNAGSLI-MIVTGMWADRLNGKWMV-- 144

  Fly    97 ATAIGGILC-----FFHPIAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTERGLLTTG 156
              .||.:||     ....:|:||.|.:: :.|:..|.....:.|.|::|:.:|.|:.||......
 Worm   145 --FIGLLLCCIGNLMLPLLASKSFWFAV-LARISIGASDACLMPAVNSLITRWFPQAERPAAIGL 206

  Fly   157 VYSGAQFGTAVILVTSGFIF---ESSMGWPGLFYLSGGLSLAWALLFFWQAANEPVTASRISKGE 218
            :..|.|.||..||.|:|::.   :...|||.:||||..:|:...:.:....|::|.....||..|
 Worm   207 ISGGRQIGTLFILPTAGYLCTRKDILDGWPAIFYLSATISVLVTVFWIPFGADKPAKQICISSRE 271

  Fly   219 VEYIESLTGSNS----SSQSMPVPWMSIFRSPAFYGLLAAHCGFTWGFYTLLTEMPTYMSMVLQL 279
            .|:||:.....|    :.::..||:.::..|...:..:.|.....:....:|..:|.||..||:.
 Worm   272 KEFIETRIACESIGKRTDRTRRVPYGAMLHSKPLWACIFALICHEYPLVIMLQFLPNYMRDVLEF 336

  Fly   280 NVKSNAFLSSLPYFAMGLLCFVVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTA 344
            ....|..:::||...:.|.....|.:|..|..:..:..|...|.||::...|...|:..:.:...
 Worm   337 APTKNGIIAALPILCLFLSKTFSSSLSSYLTTKLRLDKTFVCKGFNAVASAGLAICISFVPFFNK 401

  Fly   345 DEKTWAILLLTLAVGINAGC-SCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPLVVGAIVSD 408
            :....|:..|..|: |.||. :.|.:...:.::|.|:|.:.|.:.......||...::...|| .
 Worm   402 ESAFLAVFCLCGAM-IFAGLHTPGVITAMVQIAPAFSGIITGWSFFAVAWFSIGNKILTKYIV-Q 464

  Fly   409 EEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQIWNEPPSTSSTM-----TLRSHQENDSKSIV 468
            ....::|.|||.::..:..:...:|.|:|.|..:.|..|.|..|..     ::|......|::..
 Worm   465 SGSVTEWGMVFRVSALVAALPVIVFTIWGSADREWWAAPSSKCSVASFHRPSIRDRSREMSRATS 529

  Fly   469 PTS 471
            .||
 Worm   530 STS 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS 23..436 CDD:119392 98/416 (24%)
2A0114euk 25..447 CDD:129972 102/427 (24%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 103/430 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I8440
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

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