DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS12 and C39E9.7

DIOPT Version :9

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_502511.3 Gene:C39E9.7 / 183346 WormBaseID:WBGene00008031 Length:498 Species:Caenorhabditis elegans


Alignment Length:532 Identity:95/532 - (17%)
Similarity:184/532 - (34%) Gaps:108/532 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GFEPSEDKARPGGLGVRHWQAVLLFVGMM---------------INYFQRV----------NISA 41
            |:|  |.|:.|....::|.....:|:..:               ||:....          .|..
 Worm    12 GYE--EKKSSPSMENIKHIPFFFIFLCTLCMASIYSNPTVYQSTINFLHEFRNSSESDFYEEIDN 74

  Fly    42 AIVPMTQSTAGA----PFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGG 102
            ...|..|::...    .:|..:...:|||..:.. |.|::..|........|.:....:...|..
 Worm    75 QYDPAKQTSRDVIVKYVYYLSNPQKESLITVTSV-GTVLAATPITFAYNNMGFRRSFVMCAFISI 138

  Fly   103 ILCFFHPIA--AKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTERGLLTTGVYSGAQFGT 165
            |...|.||.  ||:...:| :||:..|.......|.: ..|:.::| .:...:...|::.:....
 Worm   139 IPALFFPICVNAKTYLLAI-ILRIFQGCSLAAFIPYI-CKLSVFIP-FDHIAVPIIVFAYSHISE 200

  Fly   166 AVILVTSGFIFESSMGWPGLFYLSGG------LSLAWALLFFWQAANEPVTASRISKGEVEYIES 224
            ..:......:..||:||....|  |.      :...:.|:.|.:...|............||   
 Worm   201 IFVHPIVSHMASSSLGWHSAHY--GAVITIVIIFFVFVLIHFDEDFKERAGTIGFCNAMFEY--- 260

  Fly   225 LTGSNSSSQSMPVPWMSIFRS----PAFYGLLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNA 285
             ..:.|.:..:.:|::||::.    ..|:...|..|.... ||..   .||:...||..:..|:|
 Worm   261 -ERTRSRTFDLRIPYLSIYQDFRIWVIFFTSFAYGCALQL-FYQF---GPTFFHKVLGHSEISSA 320

  Fly   286 FLSSLPYFAMGLLCFVVSPISDLLINRGTISI--------TTARKLFNSI--GQWGPMACLIGLG 340
            :.:            :::||.:|:.:..::.:        ....:.||:|  |..|  ..|..||
 Worm   321 YFT------------IIAPILNLVTSCSSVYLFEKLANGEQNKMRFFNTIAFGTCG--IFLFTLG 371

  Fly   341 YMTADEKTWAILLLTLAVGINAGCS-CGYL------INHIDLSPNFAGPMMGVTNGIAGVTSIIA 398
            :.......:.:.::.:......||| .|:|      ..|:.|       .:.|...|...|::..
 Worm   372 FFNPVNHKYIVTVMYILASSLLGCSYAGHLRMNQLRSGHLHL-------FLLVNIFIVNSTAMFF 429

  Fly   399 PLVVGAIVSDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKATIQIWNEPPSTSSTMTLRSHQEND 463
            ..::..:::...|.|.|..:|.:.....::.|.||..|..:....|             :.:..:
 Worm   430 SSLLNVLIAKNTDYSSWSTLFIVHAIFLIIANIIFFFFCSSERAPW-------------AKEGYE 481

  Fly   464 SKSIVPTSDKDI 475
            ..||.|..|:.:
 Worm   482 DSSIQPYRDEPL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS 23..436 CDD:119392 83/470 (18%)
2A0114euk 25..447 CDD:129972 85/479 (18%)
C39E9.7NP_502511.3 MFS 86..452 CDD:119392 74/400 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.