DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS12 and slc-17.3

DIOPT Version :10

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_498709.2 Gene:slc-17.3 / 182107 WormBaseID:WBGene00015333 Length:535 Species:Caenorhabditis elegans


Alignment Length:506 Identity:112/506 - (22%)
Similarity:211/506 - (41%) Gaps:66/506 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLLFVGMMINYFQRVNISAAIVPMTQSTA------------------------------------ 51
            :|..:|.....|.|::.:..:..|..|||                                    
 Worm    19 LLCMIGFFCTTFMRIHFALTMTCMVNSTALAVENEIKLAGNSNVSEISIIEEINLGSNGQCGLMD 83

  Fly    52 -----------GAPFYTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGILC 105
                       |... .|::.:::||.|..|||.:::.:|:....:||..:.||.::.|:..::.
 Worm    84 EDGQKKVVVDYGGEL-VWNSYEQNLIFSGTFWGSLITVLPSMFFIERFSPRHVLQISVALYILVT 147

  Fly   106 FFHP-IAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTERGLLTTGVYSGAQFGTAVIL 169
            ...| :|...|:.|:.:.|:..||.:|.|:|..:.::..|.|.:|:....:....|.|..:|...
 Worm   148 VITPFLATHFGYFSVFLARIGMGLGEGFVFPTNNAIIGNWFPSSEKSTALSIFTLGNQIASAAGS 212

  Fly   170 VTSGFIFESSMGWPGLFYLSGGLSLAWALLFFWQAANEPVTASRISKGEVEYI--ESLTGSNSSS 232
            .....:..|.:|||..||.:|..:..|::|:|:.|::.|.....::|.|.||:  ..:...:.|.
 Worm   213 PMVAAVCASDLGWPATFYFAGIFATGWSILWFFTASSHPAKVKMMTKKEKEYLLANVVKKVHKSE 277

  Fly   233 QSMPVPWMSIFRSPAFYGLLAAHCGFTWGFYTLL-TEMPTYMSMVLQLNVKSNAFLSSLPYFAMG 296
            ::..:|:..|..||||.|.|..|. |...|.||. ..:|:|...||.|.|.:|...:::|.. ..
 Worm   278 KTRSIPYSKILTSPAFLGQLQCHF-FVNLFMTLFQIYLPSYFKEVLHLGVIANGTFTAIPNI-FN 340

  Fly   297 LLCFVVSPIS-DLLINRGTISITTARKLFNSIGQWGPMACLIGLG-YMTADEKTWAILLLTLAVG 359
            ::..||..|. |.|.....:|.|.|.|:.:.:..:|....||.|. ::.....|..::...|...
 Worm   341 MIFKVVWGIGIDKLKENKILSNTKAVKVSHGVASFGSSFSLILLAFFVDCSNPTTGLIFFCLMYS 405

  Fly   360 INAGCSCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPLVVGAIVSDEEDPSQWRMVFFITGG 424
            .......|:..:.:.|:|.:...|..::..:|.:..:..|.|:.....| ...::|:.:|.....
 Worm   406 SMGTFVSGFYTSLLSLAPQYTATMSAISMFVAMIGRLTTPAVMSMFRKD-GTAAEWQNIFIGCSL 469

  Fly   425 IYLVCNTIFVIFGKATIQIWNEPPSTSSTMTLRSHQENDSKSIVPTSDKDI 475
            .::...:||::||...:|.|.:         :...||.:.|..:.|.:..|
 Worm   470 AHIFSGSIFLLFGSGELQDWAK---------VEDDQEMNEKEKLKTIENGI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS_SLC17 22..437 CDD:340876 103/466 (22%)
slc-17.3NP_498709.2 MFS 19..482 CDD:475125 103/466 (22%)

Return to query results.
Submit another query.