DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS12 and M117.1

DIOPT Version :9

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_502234.2 Gene:M117.1 / 178112 WormBaseID:WBGene00010918 Length:523 Species:Caenorhabditis elegans


Alignment Length:441 Identity:85/441 - (19%)
Similarity:187/441 - (42%) Gaps:28/441 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LGVRH---WQAVLLF---VGMMINYFQRVNISAAIVPMTQSTAGA----PFYTWDTSDKSLILSS 69
            |.::|   |...:|.   :|.::|.....:.|...:....:.|..    ..|.:...:||.::|:
 Worm    70 LSMKHRIRWVIFILTWLQLGSVMNCVDVFSFSMVYMEKNSTIAAEAGLDDIYIYTLEEKSSLISA 134

  Fly    70 FFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGILCFFHPIAAKSGWQSICVLRVLTGLVQGTVY 134
            ...|.::...|..:|.:::|.:|||..|:.:..::..|.|.|..:.:....|.|:..|::....:
 Worm   135 MAIGSLIGMYPQNVLMQKYGPRLVLTFASLLCAVVTAFMPWALDTNYHVALVFRIFQGILYSADF 199

  Fly   135 PCVHTLLAKWVPRTERGLLTTGVYSGAQFGTAVILVTSGFIFESSMGWPGLFYLSGGLSLAWALL 199
            ..|..:.:||.|..|.| ::....||.....|||.:.......|::||..::|:...:.....::
 Worm   200 GVVGYVCSKWSPIKEVG-MSLAALSGFTAARAVIQLPLAGWTTSNVGWRPIYYILSIILFISTII 263

  Fly   200 FFWQAANEPVTASRISKGEVEYIESLTGSNSSSQSMPVPWMSIFRSPAFYGLLAAHCGFTWGFYT 264
            :|....::|.....::..|:::|   .|.....::...|:..:....:.:.:..|.....:..:.
 Worm   264 WFLFYRDDPEDHCLMTHHELQHI---GGGTKRDKTKKTPYREVLTDKSVWAVWVAGFADIFASFV 325

  Fly   265 LLTEMPTYMSMVLQLNVKSNAFLSSLP-YFAMGLLCFVVSPISDLLINRGTISITTARKLFNSIG 328
            .|.....|. ..|.:::::||:|:|:. |..:|:..| ....||.:   .|:...:..:|||:|.
 Worm   326 FLVYGAQYY-QYLGMDIQANAWLNSMKGYLFIGVRVF-AGIASDRI---RTLPEKSKLRLFNTIS 385

  Fly   329 QWGPMACLIGLGYMTADEKTWAILLLTL---AVGINAGCSCGYLINHIDLSPNFAGPMMGVTNGI 390
            ...|...|:.:..:..:.....::.:|.   :.|.|.|   |:......:|..|:..::|.....
 Worm   386 LQVPAFFLMLVVLLPREHPYLHVICITFYQASFGFNCG---GFYKGAALISRQFSYFVIGYIQLF 447

  Fly   391 AGVTSIIAPLVVGAIV--SDEEDPSQWRMVFFITGGIYLVCNTIFVIFGKA 439
            ..:.:::.|::...:|  ..|:....|...|.|......|.||::|:..::
 Worm   448 KSLATLLEPVLFSLLVLPGSEDSELSWTSYFLIHALTLTVANTVYVLLARS 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS 23..436 CDD:119392 82/425 (19%)
2A0114euk 25..447 CDD:129972 82/428 (19%)
M117.1NP_502234.2 2A0114euk 66..499 CDD:129972 85/441 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.