DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS12 and MFS17

DIOPT Version :10

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_562148.5 Gene:MFS17 / 1274546 VectorBaseID:AGAMI1_013574 Length:549 Species:Anopheles gambiae


Alignment Length:488 Identity:137/488 - (28%)
Similarity:229/488 - (46%) Gaps:65/488 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLLFV---GMMINYFQRVNISAAIVPMTQ----STAGAPF------------------YT----- 57
            ||.|:   |.::::..|.:|:.|:|.|.|    :|.|:..                  ||     
Mosquito    39 VLYFLSWSGFLVSFVMRNDINFALVAMVQDPSANTTGSDHCNTLVNDVPSLEEGDNYNYTLSVAN 103

  Fly    58 -------------------WDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGI 103
                               ||::.:::|.|||:|.||:|||..|:..:.||.|.|.|.:..:...
Mosquito   104 ATTTVLLDGPASIDDIKFDWDSTVQAVIKSSFYWCYVLSQVVGGVATQYFGTKNVFGWSQFLTAA 168

  Fly   104 LCFFHPIAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTERGLLTTGVYSGAQFGTAVI 168
            .....|.||...:.::.:||.:.|...|..:|.::.::..|:|..||....:. :.|...|..:.
Mosquito   169 CSLLIPHAADLHYGAVILLRSVQGFASGLTWPAMYAIVGYWIPPVERSRFMSS-FQGFSIGIGLT 232

  Fly   169 LVTSGFIFESSMGWPGLFYLSGGLSLAWALLFFWQAANEPVTASRISKGEVEYIE-SLTGSNSSS 232
            ....|||. :..||..:||.:|.:.:.|.:.::..|.|.|....||:..|:|||| :::....:.
Mosquito   233 YPLCGFII-AHFGWRQVFYTTGTIGMVWCVFWYLLAYNTPQEHPRITPEELEYIELNVSEDIKNG 296

  Fly   233 QSMPVPWMSIFRSPAFYGLLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLP----YF 293
            |.|.|||..||.|...:.:.....|..|..||.:...|.||..:...:::.|..||..|    |.
Mosquito   297 QGMRVPWRRIFTSMPVWAIGLTTFGRIWVHYTFIMSGPEYMQKIFCFDIQQNGLLSGAPFLCSYL 361

  Fly   294 AMGLLCFVVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTADEKTWAILLLTLAV 358
            :..|.|:|    :|||::..|:::|..||||.::.|..|...::.:||:.....| .::|..:||
Mosquito   362 SSVLFCYV----ADLLMDNKTLTLTNVRKLFTALSQIVPGVLVLLVGYLGYQIVT-VLILWFIAV 421

  Fly   359 GINAGCSCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPLVVGAIVSDEEDPSQWRMVFFITG 423
            ........|.:.|.:|::||.|||::.....|....|.:.|||.|.:|:|.::.:||..||.::.
Mosquito   422 TFITASYAGAMANIVDIAPNLAGPVLAFAQTIHMTASFLQPLVTGFMVTDSQNINQWLHVFGVSS 486

  Fly   424 GIYLVCNTIFVIFGKATIQIWN----EPPSTSS 452
            .:.:....|:.:||.|.||.||    :|..|||
Mosquito   487 VVAISTYLIYQVFGTAEIQSWNYPVPDPEVTSS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS_SLC17 22..437 CDD:340876 126/467 (27%)
MFS17XP_562148.5 None

Return to query results.
Submit another query.