DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MFS12 and Slc17a7

DIOPT Version :9

Sequence 1:NP_610332.3 Gene:MFS12 / 35745 FlyBaseID:FBgn0033234 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_038966881.1 Gene:Slc17a7 / 116638 RGDID:620101 Length:585 Species:Rattus norvegicus


Alignment Length:477 Identity:138/477 - (28%)
Similarity:222/477 - (46%) Gaps:44/477 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GLGVRHWQAVLLFVGMMINYFQRVNISAAIVPMTQST---------AGAPF-------------- 55
            ||..|:..|::..:|..|::..|.|:..|||.|..::         ...|:              
  Rat    58 GLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTTHRGGHVVVQTPYRSVHKQEAVTPTVG 122

  Fly    56 -----------YTWDTSDKSLILSSFFWGYVVSQVPAGLLAKRFGAKLVLGLATAIGGILCFFHP 109
                       :.||.....||..||||||:|:|:|.|.:.::|.|..|.|.|......|....|
  Rat   123 DIQGGDTEKAQFNWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIP 187

  Fly   110 IAAKSGWQSICVLRVLTGLVQGTVYPCVHTLLAKWVPRTERGLLTTGVYSGAQFGTAVILVTSGF 174
            .||:..:..:..:|:|.|||:|..||..|.:.:||.|..||..|.|..:.|:..|..|.:..:|.
  Rat   188 SAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGV 252

  Fly   175 IFESSMGWPGLFYLSGGLSLAWALLFFWQAANEPVTASRISKGEVEYIESLTGSNSSSQSMPV-- 237
            :.:.| ||..:||:.|...:.|.|.:...:...|.....||:.|.:|||...|.::...: ||  
  Rat   253 LVQYS-GWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMN-PVTK 315

  Fly   238 ---PWMSIFRSPAFYGLLAAHCGFTWGFYTLLTEMPTYMSMVLQLNVKSNAFLSSLPYFAMGLLC 299
               ||...|.|...|.::.|:...:|.||.||...|.|...|....:.....:|:||:..|.::.
  Rat   316 FNTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIV 380

  Fly   300 FVVSPISDLLINRGTISITTARKLFNSIGQWGPMACLIGLGYMTADEKTWAILLLTLAVGINAGC 364
            .:...|:|.|.:|..:|.|..|||.|..|.......|:.:||  :..|..||..|.||||.:...
  Rat   381 PIGGQIADFLRSRHIMSTTNVRKLMNCGGFGMEATLLLVVGY--SHSKGVAISFLVLAVGFSGFA 443

  Fly   365 SCGYLINHIDLSPNFAGPMMGVTNGIAGVTSIIAPLVVGAIVSDEEDPSQWRMVFFITGGIYLVC 429
            ..|:.:||:|::|.:|..:||::||:..::.::.|::||| ::..:...:|:.||.|...::...
  Rat   444 ISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGA-MTKHKTREEWQYVFLIASLVHYGG 507

  Fly   430 NTIFVIFGKATIQIWNEPPSTS 451
            ...:.:|.....|.|.||...|
  Rat   508 VIFYGVFASGEKQPWAEPEEMS 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MFS12NP_610332.3 MFS 23..436 CDD:119392 128/451 (28%)
2A0114euk 25..447 CDD:129972 131/460 (28%)
Slc17a7XP_038966881.1 MFS_SLC17A6_7_8_VGluT 66..515 CDD:340940 129/453 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342468
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.