DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4A and PKDM7D

DIOPT Version :10

Sequence 1:NP_610331.1 Gene:Kdm4A / 35744 FlyBaseID:FBgn0033233 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_172338.5 Gene:PKDM7D / 837384 AraportID:AT1G08620 Length:1223 Species:Arabidopsis thaliana


Alignment Length:389 Identity:105/389 - (26%)
Similarity:151/389 - (38%) Gaps:102/389 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVP-------------------------- 59
            |.||.|||::...||..|... |...|:.:|.||..|.|                          
plant   163 FYPSEEEFEDTLNYIAKIRPE-AEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFTTRVQRVDKLQ 226

  Fly    60 ----------------------RKSGYDIDNINMTIPAPICQVVTGAHGVYQQINIQQRRQMTLR 102
                                  .|.|.|.....|..|   |...||.:.: :....:.....||:
plant   227 NRSSMKKISKLPNQMRKKKRKCMKMGMDSVTNGMGDP---CSASTGMNEL-ETFGFEPGPGFTLK 287

  Fly   103 QFM--------------EKANSELHQTPRHFD-----YDDLERKYW----KNITYISPLYAADVK 144
            .|.              |.:..:..:.....|     .:|:|.:||    |....|..||.||::
plant   288 DFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWRIVDKATEEIEVLYGADLE 352

  Fly   145 ---------------GSLSDED---LDVWNIGRL----DTILNLVNTDYNIIIDGVNTAYLYFGM 187
                           .:.|.||   ...||:...    .::|....:|    |.||...:||.||
plant   353 TGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSD----ISGVLVPWLYIGM 413

  Fly   188 WKSSFAWHTEDMDLYSINYLHFGAPKTWYAIPPAYGRRLEKLANETFSENYQECNAYLRHKMTMI 252
            ..|||.||.||..|||:||:|:||||.||.:......:||:...:...:.::|....|...:|.:
plant   414 CFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQL 478

  Fly   253 SPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICRCR 316
            ||..|:...:|.::..|.|||.::|||..||||||.|||.||:.|.|...|:.:|:.|....|:
plant   479 SPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQ 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4ANP_610331.1 JmjN 17..59 CDD:472837 15/37 (41%)
JmjC 182..298 CDD:396791 50/115 (43%)
PKDM7DNP_172338.5 JmjN 161..193 CDD:460542 11/30 (37%)
JmjC 408..524 CDD:396791 50/115 (43%)
zf-C5HC2 631..683 CDD:460750
FYRN 1002..1046 CDD:128814
FYRC 1052..1146 CDD:197781
Blue background indicates that the domain is not in the aligned region.

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