DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4A and JMJ14

DIOPT Version :10

Sequence 1:NP_610331.1 Gene:Kdm4A / 35744 FlyBaseID:FBgn0033233 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_193773.2 Gene:JMJ14 / 827788 AraportID:AT4G20400 Length:954 Species:Arabidopsis thaliana


Alignment Length:497 Identity:119/497 - (23%)
Similarity:186/497 - (37%) Gaps:136/497 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVP-----RKSGYDIDNINMTIPAPI--- 77
            |.|:.|:|.:...|||.:.|: |...|:.:|.||..|.|     .|..::    |...|..|   
plant    59 FYPTNEDFDDPLGYIEKLRSK-AESYGICRIVPPVAWRPPCPLKEKKIWE----NSKFPTRIQFI 118

  Fly    78 ------------------------------------CQVV-TGAHGVYQQINIQQRRQMTLRQFM 105
                                                |... :|:.....:...|.....||.:|.
plant   119 DLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSEGKFGFQTGPDFTLEEFQ 183

  Fly   106 E------------------KANSELHQTPRHFDYDDLERKYWKNITY----ISPLYAADVK---- 144
            :                  ||:......|:   ..|||.:||:.:..    :...|.||::    
plant   184 KYDEYFKECYFQSEDHPGSKASENKKFKPK---VKDLEGEYWRIVEQATDEVEVYYGADLETKKF 245

  Fly   145 GS----------LSDEDLDV---WNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHT 196
            ||          :|:.|...   ||:..|..:...|....:..|.||...:||.||..|:|.||.
plant   246 GSGFPKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHV 310

  Fly   197 EDMDLYSINYLHFGAPKTWYAIPPAYGRRLEKLANETFSENYQECNAYLRHKMTMISPKVLRQHN 261
            ||..|||:||||.|.||.||.||..:....|.:..:...:.::|....|...:|.:||::|::..
plant   311 EDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQPDLLHQLVTQLSPRILKEEG 375

  Fly   262 IPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICRCRSDMVKISMET 326
            :|..:..|.:||.::|||..||:|||.|||.||:.|.|...|:.:|:.|           :...:
plant   376 VPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLVHGQNA-----------VEGYS 429

  Fly   327 FVRRFQPERYDNWLKGQDMG------------------------CHPEEPGKICAAAPPTLNEYE 367
            ..||.....:|..|.|..|.                        |  .|.|.:..|....:...|
plant   430 KQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKKTPVIARWKRVC--SEDGLLTKAVKKRVQMEE 492

  Fly   368 KQEN-------LRAAKSEEESPQKRGCSLAGNGCERNAESAE 402
            ::.|       ||..:.:.::.::|.|.|.......:|.|.:
plant   493 ERLNHLQDGFSLRKMEGDFDNKRERECFLCFYDLHMSASSCK 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4ANP_610331.1 JmjN 17..59 CDD:472837 14/37 (38%)
JmjC 182..298 CDD:396791 48/115 (42%)
JMJ14NP_193773.2 JmjC 296..412 CDD:396791 48/115 (42%)
zf-C5HC2 519..571 CDD:460750 4/16 (25%)
FYRN 743..784 CDD:470644
FYRC 790..876 CDD:197781
JmjN 56..96 CDD:128818 14/37 (38%)
Blue background indicates that the domain is not in the aligned region.

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