Protein Alignment Kdm4A and REF6

DIOPT Version :9

• Sequence 1: NP_610331.1
• Gene: Kdm4A / 35744
• FlyBaseID: FBgn0033233
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_680116.2
• Gene: REF6 / 824002
• AraportID: AT3G48430
• Length: 1360
• Species: Arabidopsis thaliana
• Alignment Length: 613
• Identity: 148/613 - (24%)
• Similarity: 232/613 - (37%)
• Gaps: 175/613 - (28%)

  Fly     8 ADEEQNKVPRIMT------FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVPRKSGYDI 66
            :::.|:..|.:.:      |||:..|||:..|||..||...:.. |:.||.||..  |......|
plant     4 SEQSQDVFPWLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRY-GICKILPPLP--PPSKKTSI 65

  Fly    67 DNINMTIPA-PICQVVTGAHGV------------YQQINIQQRRQMTLRQFM-----EKANSELH 113
            .|:|.::.| ...:|..|..|.            .|||....|:|..:::.:     |.:..|..
plant    66 SNLNRSLAARAAARVRDGGFGACDYDGGPTFATRQQQIGFCPRKQRPVQRPVWQSGEEYSFGEFE 130

  Fly   114 QTPRHFDYD--------------DLERKYWKNITYISPL---YAADVKGSL-------------- 147
            ...::|:.:              ::|..||: .|...|.   ||.|:.||.
plant   131 FKAKNFEKNYLKKCGKKSQLSALEIETLYWR-ATVDKPFSVEYANDMPGSAFIPLSLAAARRRES 194

  Fly   148 SDEDLDV----WNIGRLD----TILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSI 204
            ..|...|    ||:..:.    ::|..:..:    |.||.:..:|..|..|.||||.||.||:|:
plant   195 GGEGGTVGETAWNMRAMSRAEGSLLKFMKEE----IPGVTSPMVYVAMMFSWFAWHVEDHDLHSL 255

  Fly   205 NYLHFGAPKTWYAIPP-------------AYGRRLEKLANETFSENYQECNAYLRHKMTMISPKV 256
            ||||.||.||||.:|.             .||..|..|.  |||.        |..|.|::||:|
plant   256 NYLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEELNPLV--TFST--------LGEKTTVMSPEV 310

  Fly   257 LRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICR------- 314
            ..:..||..::.|..||.::|||..||:||:||||..|::|.|:..|:...|.|:|.|
plant   311 FVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYPP 375

  Fly   315 -----------------------------------CRSDMVKISMETFVRRF--QPERYDNWLKG 342
                                               .||:..:::.:.||:..  ..|...:..||
plant   376 MVSHLQLLYDFVLALGSRVPTSINPKPRSSRLKDKARSEGERLTKKLFVQNIIHNNELLSSLGKG 440

  Fly   343 QDMGCHPEEPGKICAAAPPTLNEY--EKQENLRAAKSEEESPQKRGCSLAGNG------------ 393
            ..:...|:....|...:...:..:  ..|||....|.|:.|.......|: ||
plant   441 SPVALLPQSSSDISVCSDLRIGSHLITNQENPIQLKCEDLSSDSVVVDLS-NGLKDTVSVKEKFT 504

  Fly   394 --CE--RNAESAEDVDDKASVSSYSSCRQLQPVVKL---RKLPTI---------ASVPEPSSAPK 442
              ||  ||..::.:.|.:.::|. :..|:....|.|   |....:         .::.:|..|..
plant   505 SLCERSRNHLASTEKDTQETLSD-AERRKNDAAVALSDQRLFSCVTCGVLSFDCVAIVQPKEAAA 568

  Fly   443 RYDFNTEAVVRVKRLWNELPCPDRGANL 470
            ||..:.:.     ..:|:.......|||
plant   569 RYLMSADC-----SFFNDWTAASGSANL 591

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Kdm4A	NP_610331.1	JmjN	17..59	CDD:301729	16/47 (34%)
		JmjC	182..298	CDD:202224	53/128 (41%)
REF6	NP_680116.2	JmjN	21..52	CDD:280526	12/31 (39%)
		JmjC	233..352	CDD:202224	53/128 (41%)
		C2H2 Zn finger	1245..1266	CDD:275368
		C2H2 Zn finger	1268..1290	CDD:275368
		C2H2 Zn finger	1298..1320	CDD:275368
		C2H2 Zn finger	1328..1348	CDD:275368

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	2	1.870