Sequence 1: | NP_610331.1 | Gene: | Kdm4A / 35744 | FlyBaseID: | FBgn0033233 | Length: | 495 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_680116.2 | Gene: | REF6 / 824002 | AraportID: | AT3G48430 | Length: | 1360 | Species: | Arabidopsis thaliana |
Alignment Length: | 613 | Identity: | 148/613 - (24%) |
---|---|---|---|
Similarity: | 232/613 - (37%) | Gaps: | 175/613 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 ADEEQNKVPRIMT------FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVPRKSGYDI 66
Fly 67 DNINMTIPA-PICQVVTGAHGV------------YQQINIQQRRQMTLRQFM-----EKANSELH 113
Fly 114 QTPRHFDYD--------------DLERKYWKNITYISPL---YAADVKGSL-------------- 147
Fly 148 SDEDLDV----WNIGRLD----TILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSI 204
Fly 205 NYLHFGAPKTWYAIPP-------------AYGRRLEKLANETFSENYQECNAYLRHKMTMISPKV 256
Fly 257 LRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICR------- 314
Fly 315 -----------------------------------CRSDMVKISMETFVRRF--QPERYDNWLKG 342
Fly 343 QDMGCHPEEPGKICAAAPPTLNEY--EKQENLRAAKSEEESPQKRGCSLAGNG------------ 393
Fly 394 --CE--RNAESAEDVDDKASVSSYSSCRQLQPVVKL---RKLPTI---------ASVPEPSSAPK 442
Fly 443 RYDFNTEAVVRVKRLWNELPCPDRGANL 470 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Kdm4A | NP_610331.1 | JmjN | 17..59 | CDD:301729 | 16/47 (34%) |
JmjC | 182..298 | CDD:202224 | 53/128 (41%) | ||
REF6 | NP_680116.2 | JmjN | 21..52 | CDD:280526 | 12/31 (39%) |
JmjC | 233..352 | CDD:202224 | 53/128 (41%) | ||
C2H2 Zn finger | 1245..1266 | CDD:275368 | |||
C2H2 Zn finger | 1268..1290 | CDD:275368 | |||
C2H2 Zn finger | 1298..1320 | CDD:275368 | |||
C2H2 Zn finger | 1328..1348 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.870 |